hdeA:Quickview: Difference between revisions
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{| | {| id="F49aee87cbc19e" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''hdeA'' | |||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3494, b3510, JW3478, yhhC, yhiB''<ref name='LIB:Riley_2006'/>, yhiB'' | |||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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acid-resistance protein, possible chaperone<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | |||
Component of [[:Category:Complex:HdeA dimer, inactive form of acid-resistance protein|HdeA dimer, inactive form of acid-resistance protein]]<ref name='LIB:EcoCyc11.1'/> | |||
Periplasmic chaperone of acid-denatured proteins; H-NS repressed<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''stress response protein acid-resistance protein<ref name='LIB:Riley_2006'/>, B3510<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HdeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3494, JW3478, yhhC, yhiB, b3510'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:hdeAB|hdeAB]]<ref name='LIB:EcoCyc10.6'/> | |||
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hdeA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11398]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001364&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hdeA&loc=MG1655%3A3654763..3654431,W3110%3A3983675..3984007,DH10B%3A3752508..3752176,REL606%3A3586231..3585899,BW2952%3A3542925..3543257]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3542925&end=3543257&gene=hdeA&aa=mkkvlgvilggllllpvvsnaadaqkaadnkkpvnswtcedflavdesfqptavgfaealnnkdkpedavldvqgiatvtpaivqactqdkqanfkdkvkgewdkikkdm]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hdeA+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hdeA]] | |||
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Latest revision as of 21:49, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
hdeA |
|---|---|
| Gene Synonym(s) |
ECK3494, b3510, JW3478, yhhC, yhiB[1], yhiB |
| Product Desc. |
acid-resistance protein, possible chaperone[2][3]; Component of HdeA dimer, inactive form of acid-resistance protein[3] Periplasmic chaperone of acid-denatured proteins; H-NS repressed[4] |
| Product Synonyms(s) |
stress response protein acid-resistance protein[1], B3510[2][1], YhhC[2][1], YhiB[2][1], HdeA[2][1] , ECK3494, JW3478, yhhC, yhiB, b3510 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Overexpression causes abnormal biofilm architecture. Acid-inducible and important for acid survival. HdeA and HdeB are both involved in periplasmic protein solubilization at pH 3; HdeA is involved in periplasmic protein solubilization at pH 2 (Kern, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.