acrE:Quickview: Difference between revisions

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Latest revision as of 21:53, 27 May 2013

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Quickview

Standard Name	acrE
Gene Synonym(s)	ECK3252, b3265, JW3233, G7979^[1]^[2], envC
Product Desc.	transmembrane protein affects septum formation and cell membrane permeability^[2]^[3]; Component of AcrEF-TolC Multidrug Efflux Transport System^[3] AcrEF-TolC efflux pump, multidrug/solvent resistance; membrane-fusion lipoprotein^[4]
Product Synonyms(s)	cytoplasmic membrane lipoprotein^[1], B3265^[2]^[1], AcrE^[2]^[1] , ECK3252, envC, JW3233, b3265
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): acrEF^[2]
Regulation/Activity
Quick Links
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Notes

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AcrE is attached to the inner membrane. AcrEF confers resistance to nalidixic acid, acriflavin, indole and solvents. acrE is an acrA paralog. May have role in cell division. First 23 aa are a type II signal peptide.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] 3.0 ^3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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[2]

[3]

[4]

@@ Line 23: / Line 23: @@
 *   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
-****************************************************************************************** -->{{Quickview_table_help}}
+****************************************************************************************** -->
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+{|   id="Y49aedf3388b2b"  class=" tableEdit New_Quickview_Table"
 |-
 !align=left {{table_heading_style}} |Standard Name
+||
+''acrE''
 |-
 !align=left {{table_heading_style}} |Gene Synonym(s)
+||
+''ECK3252, b3265, JW3233, G7979''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, envC''
 |-
 !align=left {{table_heading_style}} |Product Desc.
+||
+transmembrane protein affects septum formation and cell membrane permeability<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
+Component of [[:Category:Complex:AcrEF-TolC Multidrug Efflux Transport System|AcrEF-TolC Multidrug Efflux Transport System]]<ref name='LIB:EcoCyc11.1'/>
+AcrEF-TolC efflux pump, multidrug/solvent resistance; membrane-fusion lipoprotein<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''cytoplasmic membrane lipoprotein<ref name='LIB:Riley_2006'/>, B3265<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcrE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3252, envC, JW3233, b3265''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
 !align=left {{table_heading_style}} |Knock-Out Phenotype
+||
 |-
 !align=left {{table_heading_style}} |Regulation/Expression
+||
+transcription unit(s): [[:Category:Txn_unit:acrEF|acrEF]]<ref name='LIB:EcoCyc10.6'/>
 |-
 !align=left {{table_heading_style}} |Regulation/Activity
+||
+|-
+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=acrE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10266]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000260&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=acrE&loc=MG1655%3A3411886..3413043,W3110%3A3413719..3414876,REL606%3A3341755..3342912,DH10B%3A3509631..3510788,BW2952%3A3299034..3300191]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3299034&end=3300191&gene=acrE&aa=mtkharffllpsfilisaaliagcndkgeekahvgepqvtvhivktaplevktelpgrtnayriaevrpqvsgivlnrnftegsdvqagqslyqidpatyqanydsakgelakseaaaaiahltvkryvplvgtkyisqqeydqaiadarqadaaviaakatvesarinlaytkvtapisgrigkstvtegalvtngqttelatvqqldpiyvdvtqssndfmrlkqsveqgnlhkenatsnvelvmengqtyplkgtlqfsdvtvdestgsitlravfpnpqhtllpgmfvraridegvqpdailipqqgvsrtprgdatvlivndksqvearpvvasqaigdkwliseglksgdqvivsglqkarpgeqvkattdtpadtask]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=acrE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=acrE]]&nbsp;&nbsp;
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+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.8266.Y49aedf3388b2b&page=8266&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
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acrE:Quickview: Difference between revisions

Latest revision as of 21:53, 27 May 2013

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