ydhK:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ydhK:Gene|''ydhK]]'' (synonyms: ''ECK1641, b1645, JW1637'')<ref name='LIB:Riley_2006'/>
''ydhK''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ydhK:Gene_Product(s)|YdhK product]]<ref name='LIB:Riley_2006'/>: conserved inner membrane protein product, B1645 product
''ECK1641, b1645, JW1637''<ref name='LIB:Riley_2006'/>, JW1637''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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putative membrane protein<ref name='LIB:EcoCyc10.6'/> conserved inner membrane protein<ref name='LIB:EcoCyc11.1'/>  
putative membrane protein<ref name='LIB:EcoCyc10.6'/>; conserved inner membrane protein<ref name='LIB:EcoCyc11.1'/>


Putative efflux protein family (PET) component of YdhJK efflux pump, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''conserved inner membrane protein<ref name='LIB:Riley_2006'/>, YdhK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1645<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1641, JW1637, b1645''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ydhIJK|ydhIJK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ydhIJK|ydhIJK]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydhK&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6885]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003474&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydhK&loc=MG1655%3A1720145..1722157,W3110%3A1723835..1725847,DH10B%3A1810716..1812728,REL606%3A1699315..1701327,BW2952%3A1612204..1614216]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1612204&end=1614216&gene=ydhK&aa=mnasswslrnlpwfratlaqwryalrntiamclaltvayylnldepywamtsaavvsfptvggviskslgriagsllgaiaalllaghtlnepwffllsmsawlgfctwacahftnnvayafqlagytaaiiafpmvniteasqlwdiaqarvcevivgilcggmmmmilpsssdatalltalknmharllehasllwqpettdairaahegvigqiltmnllriqafwshyrfrqqnarlnallhqqlrmtsvisslrrmllnwpsppgatreileqlltalassqtdvytvariiaplrptnvadyrhvafwqrlryfcrlylqssqelhrlqsgvddhtrlprtsglarhtdnaeamwsglrtfctlmmigawsiasqwdaganaltlaaiscvlysavaapfkslsllmrtlvllslfsfvvkfglmvqisdlwqfllflfpllatmqllklqmpkfaalwgqlivfmgsfiavtnppvydfadflndnlakivgvalawlafailrpgsdarksrrhiralrrdfvdqlsrhptlsesefesltyhhvsqlsnsqdalarrwllrwgvvllncshvvwqlrdwesrsdplsrvrdncisllrgvmsergvqqkslaatleelqricdslarhhqpaarelaaivwrlycslsqleqappqgtlas]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydhK+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydhK]]&nbsp;&nbsp;


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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ydhK

Gene Synonym(s)

ECK1641, b1645, JW1637[1], JW1637

Product Desc.

putative membrane protein[2]; conserved inner membrane protein[3]

Putative efflux protein family (PET) component of YdhJK efflux pump, function unknown[4]

Product Synonyms(s)

conserved inner membrane protein[1], YdhK[2][1], B1645[2][1] , ECK1641, JW1637, b1645

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydhIJK[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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YdhK is similar to B. cepacia fusaric acid resistance protein FusC. The ydhK gene is paralogous to aaeB.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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