ybaV:Quickview: Difference between revisions

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{|   id="J49b029d8d9e29" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybaV:Gene|''ybaV]]'' (synonyms: ''ECK0436, b0442, JW0432'')<ref name='LIB:Riley_2006'/>
''ybaV''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybaV:Gene_Product(s)|YbaV product]]<ref name='LIB:Riley_2006'/>: conserved protein product, B0442 product
''ECK0436, b0442, JW0432''<ref name='LIB:Riley_2006'/>, JW0432''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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conserved hypothetical protein<ref name='LIB:EcoCyc10.6'/> conserved protein<ref name='LIB:EcoCyc11.1'/>  
conserved hypothetical protein<ref name='LIB:EcoCyc10.6'/>; conserved protein<ref name='LIB:EcoCyc11.1'/>


Competence protein ComEA homolog, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''conserved protein<ref name='LIB:Riley_2006'/>, B0442<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0436, JW0432, b0442''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybaV|ybaV]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybaV|ybaV]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybaV&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6243]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002854&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybaV&loc=MG1655%3A463161..463532,W3110%3A463161..463532,DH10B%3A402492..402863,REL606%3A435992..436363,BW2952%3A365920..366291]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=365920&end=366291&gene=ybaV&aa=mkhgikallitlslacagmshsalaaasvakptavetkaeapaaqskaavpakasdeegtrvsinnasaeelaramngvglkkaqaivsyreeygpfktvedlkqvpgmgnslvernlavltl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybaV+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybaV]]&nbsp;&nbsp;


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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybaV

Gene Synonym(s)

ECK0436, b0442, JW0432[1], JW0432

Product Desc.

conserved hypothetical protein[2]; conserved protein[3]

Competence protein ComEA homolog, function unknown[4]

Product Synonyms(s)

conserved protein[1], B0442[2][1], YbaV[2][1] , ECK0436, JW0432, b0442

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybaV[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ybaV is predicted to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006). YbaV is predicted to have a 25 aa type I signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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