ygiS:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ygiS:Gene|''ygiS]]'' (synonyms: ''ECK3011, b3020, JW2988'')<ref name='LIB:Riley_2006'/>
''ygiS''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ygiS:Gene_Product(s)|YgiS product]]<ref name='LIB:Riley_2006'/>: predicted transporter subunit: periplasmic-binding component of ABC superfamily product, B3020 product
''ECK3011, b3020, JW2988''<ref name='LIB:Riley_2006'/>, JW2988''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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predicted transporter subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted transporter subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Putative periplasmic binding protein, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted transporter subunit: periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B3020<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3011, JW2988, b3020''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ygiS|ygiS]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ygiS|ygiS]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ygiS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7570]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004128&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ygiS&loc=MG1655%3A3165740..3164133,W3110%3A3166374..3164767,DH10B%3A3263485..3261878,REL606%3A3101890..3100283,BW2952%3A3051281..3052888]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3051281&end=3052888&gene=ygiS&aa=mytrnllwlvslvsaaplyaadvpantplapqqvfrynnhsdpgtldpqkveentaaqivldlfeglvwmdgegqvqpaqaerweildggkryifhlrsglqwsdgqpltaedfvlgwqravdpktaspfagylaqahinnaaaivagkadvtslgvkatddrtlevtleqpvpwfttmlawptlfpvphhviakhgdswskpenmvyngafvldqwvvnekitarknpkyrdaqhtvlqqveylaldnsvtgynryragevdltwvpaqqipaiekslpgelriiprlnseyynfnlekppfndvrvrralyltvdrqliaqkvlglrtpattltppevkgfsattfdelqkpmservamakallkqagydashplrfelfynkydlhektaialssewkkwlgaqvtlrtmewktyldarragdfmlsrqswdatyndassflntlksdseenvghwknaqydallnqatqitdatkrnalyqqaeviinqqaplipiyyqplikllkpyvggfplhnpqdyvyskelyikah]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygiS+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ygiS]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ygiS

Gene Synonym(s)

ECK3011, b3020, JW2988[1], JW2988

Product Desc.

predicted transporter subunit[2][3]

Putative periplasmic binding protein, function unknown[4]

Product Synonyms(s)

predicted transporter subunit: periplasmic-binding component of ABC superfamily[1], B3020[2][1], YgiS[2][1] , ECK3011, JW2988, b3020

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygiS[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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First 20 aa are predicted to be a type I signal peptide.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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