sgcX:Quickview: Difference between revisions

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{|   id="J49b0252fdf35f" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[sgcX:Gene|''sgcX]]'' (synonyms: ''ECK4295, b4305, JW5776, yjhO'')<ref name='LIB:Riley_2006'/>
''sgcX''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[sgcX:Gene_Product(s)|SgcX product]]<ref name='LIB:Riley_2006'/>: KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain product, B4305 product, YjhO product
''ECK4295, b4305, JW5776, yjhO''<ref name='LIB:Riley_2006'/>, yjhO''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Peptidase homolog, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain<ref name='LIB:Riley_2006'/>, B4305<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjhO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SgcX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4295, JW5776, yjhO, b4305''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sgcR|sgcR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sgcR|sgcR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=sgcX&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12557]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002322&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=sgcX&loc=MG1655%3A4529674..4528553,W3110%3A4536331..4535210,REL606%3A4511789..4510668,DH10B%3A4631482..4630361,BW2952%3A4467288..4468409]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4467288&end=4468409&gene=sgcX&aa=mivlrsteiamsfsvqetlfsllqhnaisghenavadvmlcefrrqakevwrdrlgnvvarygsdkpdalrlmifahmdevgfmvrkiepsgflrfervggpaqvtmagsivtltgdkgpvmgcigiksyhfakgdertqspsvdklwidigakdkddairmgiqvgtpvtlynppqllandlvcskalddrlgctallgvadaistmeldiavylvasvqeefnirgivpvlrrvkpdlaigiditpscdtpdlhdysevrinqgvgitclnyhgrgtlaglitpprlirmleqtalehnipvqrevapgvitetgyiqveqdgipcaslsipcrythspaevaslrdltdcirlltalagmsaahfpvepdsgttqeahpl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sgcX+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=sgcX]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

sgcX

Gene Synonym(s)

ECK4295, b4305, JW5776, yjhO[1], yjhO

Product Desc.

KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain[2][3]

Peptidase homolog, function unknown[4]

Product Synonyms(s)

KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain[1], B4305[2][1], YjhO[2][1], SgcX[2][1] , ECK4295, JW5776, yjhO, b4305

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sgcR[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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ypdE, frvX and sgcX are paralogs. M42 family.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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