ygiM:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
Adding EcoGene Comments
touch
 
(13 intermediate revisions by 2 users not shown)
Line 10: Line 10:
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}   
<noinclude>{{TabsTop}}   
{{Tab On|Quickview|htrG}}{{Tab|Gene|htrG}}{{Tab|Gene Product(s)|htrG}}{{Tab|Expression|htrG}}{{Tab|Evolution|htrG}}{{Tab|On One Page|htrG}}{{TabsBottom}}
{{Tab On|Quickview|ygiM}}{{Tab|Gene|ygiM}}{{Tab|Gene Product(s)|ygiM}}{{Tab|Expression|ygiM}}{{Tab|Evolution|ygiM}}{{Tab|On One Page|ygiM}}{{TabsBottom}}
{|
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.7852.B46a9a1001d86d-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.7852.A49aee948652f3-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 24: Line 24:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="A49aee948652f3" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
||
||
[[htrG:Gene|''htrG]]'' (synonyms: ''ECK3045, b3055, JW3027, ygiM, ecfG'')<ref name='LIB:Riley_2006'/>
''ygiM''
|-
|-
!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
[[htrG:Gene_Product(s)|HtrG product]]<ref name='LIB:Riley_2006'/>: predicted signal transduction protein (SH3 domain) product, B3055 product, EcfG product, YgiM product
''ECK3045, b3055, JW3027, ygiM, ecfG'', htrG<ref name='LIB:Riley_2006'/>, ecfG, htrG''
|-
|-
!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
||
||
predicted signal transduction protein (SH3 domain)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted signal transduction protein (SH3 domain)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Required for growth above 43C, function unknown<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''predicted signal transduction protein (SH3 domain)<ref name='LIB:Riley_2006'/>, B3055<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcfG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ecfG, ECK3045, htrG, JW3027, b3055''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
||


|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:htrG-cca|htrG-cca]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:htrG|htrG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ygiM-cca|ygiM-cca]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:ygiM|ygiM]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=htrG&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=htrG&loc=MG1655%3A3199229..3199849,W3110%3A3199863..3200483,DH10B%3A3296974..3297594,BW2952%3A3086377..3086997]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3086377&end=3086997&gene=htrG&aa=mpklrligltllalsatavshaeetryvsdelntwvrsgpgdhyrlvgtvnageevtllqtdantnyaqvkdssgrtawiplkqlstepslrsrvpdlenqvktltdkltnidntwnqrtaemqqkvaqsdsvinglkeenqklknelivaqkkvdaasvqlddkqrtiimqwfmygggvlglglllglvlphlipsrkrkdrwmn]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=htrG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=htrG]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.7852.B46a9a1001d86d&page=7852&pagename={{FULLPAGENAMEE}}&type=1&template=Quickview_table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7852.A49aee948652f3&page=7852&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.7852.B46a9a1001d86d-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.7852.A49aee948652f3--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>

Latest revision as of 21:49, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ygiM

Gene Synonym(s)

ECK3045, b3055, JW3027, ygiM, ecfG, htrG[1], ecfG, htrG

Product Desc.

predicted signal transduction protein (SH3 domain)[2][3]

Required for growth above 43C, function unknown[4]

Product Synonyms(s)

predicted signal transduction protein (SH3 domain)[1], B3055[2][1], YgiM[2][1], EcfG[2][1], YgiM[2][1] , ecfG, ECK3045, htrG, JW3027, b3055

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygiM-cca[2], ygiM[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]





References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ygiM:Quickview&oldid=1396799"