yghB:Quickview: Difference between revisions
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imported>Wikientrybot Adding EcoGene Comments |
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{| | {| id="Q49b030f2d747b" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
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''yghB'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3001, b3009, JW2976''<ref name='LIB:Riley_2006'/>, JW2976'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
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conserved inner membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | conserved inner membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
Required, with yqjA, for membrane integrity; predicted inner membrane protein, function unknown<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''conserved inner membrane protein<ref name='LIB:Riley_2006'/>, B3009<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YghB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3001, JW2976, b3009'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:yghB|yghB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yghB|yghB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yghB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11824]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001756&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yghB&loc=MG1655%3A3151585..3152244,W3110%3A3152219..3152878,DH10B%3A3249330..3249989,REL606%3A3087735..3088394,BW2952%3A3038733..3039392]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3038733&end=3039392&gene=yghB&aa=maviqdiiaalwqhdfaaladphivsvvyfvmfatlflengllpasflpgdsllilagaliaqgvmdflptiailtaaaslgcwlsyiqgrwlgntktvkgwlaqlpakyhqratcmfdrhgllallagrflafvrtllptmagisglpnrrfqffnwlsgllwvsvvtsfgyalsmipfvkrhedqvmtflmilpialltagllgtlfvvikkkycna]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yghB+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yghB]] | |||
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Latest revision as of 21:41, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
yghB |
|---|---|
| Gene Synonym(s) |
ECK3001, b3009, JW2976[1], JW2976 |
| Product Desc. |
conserved inner membrane protein[2][3] Required, with yqjA, for membrane integrity; predicted inner membrane protein, function unknown[4] |
| Product Synonyms(s) |
conserved inner membrane protein[1], B3009[2][1], YghB[2][1] , ECK3001, JW2976, b3009 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A yqjA yghB double mutant has a membrane defect causing a cell division defect at low temperatures and an osmoremedial growth defect at elevated temperatures (Thomkins, 2008). YqjA and YghB likely have redundant functions since overproduction of either complements the defect (Thomkins, 2008). DedA family. Induced by AI-2 pheromone.[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.