yicI:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yicI:Gene|''yicI]]'' (synonyms: ''ECK3646, b3656, JW3631'')<ref name='LIB:Riley_2006'/>
''yicI''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yicI:Gene_Product(s)|YicI product]]<ref name='LIB:Riley_2006'/>: predicted alpha-glucosidase product, B3656 product
''ECK3646, b3656, JW3631''<ref name='LIB:Riley_2006'/>, JW3631''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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&alpha;-xylosidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
&alpha;-xylosidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:&alpha;-xylosidase|&alpha;-xylosidase]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:&alpha;-xylosidase|&alpha;-xylosidase]]<ref name='LIB:EcoCyc11.1'/>


alpha-Xylosidase; hexameric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted alpha-glucosidase<ref name='LIB:Riley_2006'/>, B3656<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YicI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3646, JW3631, b3656''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yicJI|yicJI]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yicJI|yicJI]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yicI&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11685]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001628&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yicI&loc=MG1655%3A3832560..3830242,W3110%3A3805878..3808196,REL606%3A3773579..3771261,DH10B%3A3930144..3927826,BW2952%3A3718575..3720893]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3718575&end=3720893&gene=yicI&aa=mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffspqegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsldflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtvetwnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyfvidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlplhvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkelqekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfgeriptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwggdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlhgsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpacdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslpvyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartgntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yicI+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yicI]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yicI

Gene Synonym(s)

ECK3646, b3656, JW3631[1], JW3631

Product Desc.

α-xylosidase[2][3];

Component of α-xylosidase[3]

alpha-Xylosidase; hexameric[4]

Product Synonyms(s)

predicted alpha-glucosidase[1], B3656[2][1], YicI[2][1] , ECK3646, JW3631, b3656

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yicJI[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YicI may be part of sugar catabolism system with upstream gene product YicJ. Substitutions C307I/F308D convert YicI from alpha-xylosidase to alpha-glucosidase.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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