ribE:Quickview: Difference between revisions

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{|   id="F49b022ab63096" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ribE:Gene|''ribE]]'' (synonyms: ''ECK0409, b0415, JW0405, ribH, ybaF, nusIII'')<ref name='LIB:Riley_2006'/>
''ribE''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ribE:Gene_Product(s)|RibE product]]<ref name='LIB:Riley_2006'/>: riboflavin synthase beta chain product, B0415 product, YbaF product, RibH product
''ECK0409, b0415, JW0405, ribH, ybaF, nusIII''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:lumazine synthase|lumazine synthase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:lumazine synthase|lumazine synthase]]<ref name='LIB:EcoCyc10.6'/>; [[:Category:Complex:lumazine synthase|6,7-dimethyl-8-ribityllumazine synthase]]<ref name='LIB:EcoCyc11.1'/>


Lumazine (6,7-dimethyl-8-ribityllumazine) synthase; 60-mer capsid; penultimate step in the biosynthesis of riboflavin; binds RibC homotrimer<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''riboflavin synthase beta chain<ref name='LIB:Riley_2006'/>, B0415<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RibH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0409, JW0405, ribH, ybaF, b0415''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybaD|ybaD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybaD|ybaD]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ribE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11322]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001293&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ribE&loc=MG1655%3A433871..434341,W3110%3A433871..434341,DH10B%3A373202..373672,BW2952%3A336630..337100]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=336630&end=337100&gene=ribE&aa=mniieanvatpdarvaitiarfnnfindsllegaidalkrigqvkdenitvvwvpgayelplaagalaktgkydavialgtvirggtahfeyvaggasnglahvaqdseipvafgvlttesieqaieragtkagnkgaeaaltaleminvlkaika]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ribE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ribE]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ribE

Gene Synonym(s)

ECK0409, b0415, JW0405, ribH, ybaF, nusIII[1]

Product Desc.

RibE[2][3];

Component of lumazine synthase[2]; 6,7-dimethyl-8-ribityllumazine synthase[3]

Lumazine (6,7-dimethyl-8-ribityllumazine) synthase; 60-mer capsid; penultimate step in the biosynthesis of riboflavin; binds RibC homotrimer[4]

Product Synonyms(s)

riboflavin synthase beta chain[1], B0415[2][1], RibE[2][1], YbaF[2][1], RibH[2][1] , ECK0409, JW0405, ribH, ybaF, b0415

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybaD[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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