sucD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[sucD:Gene|''sucD]]'' (synonyms: ''ECK0717, b0729, JW0718'')<ref name='LIB:Riley_2006'/>
''sucD''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[sucD:Gene_Product(s)|SucD product]]<ref name='LIB:Riley_2006'/>: succinyl-CoA synthetase, NAD(P)-binding, alpha subunit product, B0729 product, &alpha; subunit product
''ECK0717, b0729, JW0718''<ref name='LIB:Riley_2006'/>, JW0718''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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succinyl-CoA synthetase, &alpha; subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
succinyl-CoA synthetase, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:succinyl-CoA synthetase|succinyl-CoA synthetase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:succinyl-CoA synthetase|succinyl-CoA synthetase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Succinyl CoA synthase alpha-subunit<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''succinyl-CoA synthetase, NAD(P)-binding, alpha subunit<ref name='LIB:Riley_2006'/>, B0729<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SucD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, α subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0717, JW0718, b0729''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB, [[:Category:Txn_unit:sucABCD|sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00143, suc  
transcription unit(s): [[:Category:Txn_unit:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB, [[:Category:Txn_unit:sucABCD|sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00143, suc  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=sucD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10982]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000971&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=sucD&loc=MG1655%3A763403..764272,W3110%3A764602..765471,DH10B%3A815995..816864,REL606%3A745062..745931,BW2952%3A666163..667032]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=666163&end=667032&gene=sucD&aa=msilidkntkvicqgftgsqgtfhseqaiaygtkmvggvtpgkggtthlglpvfntvreavaatgatasviyvpapfckdsileaidagikliititegiptldmltvkvkldeagvrmigpncpgvitpgeckigiqpghihkpgkvgivsrsgtltyeavkqttdygfgqstcvgiggdpipgsnfidilemfekdpqteaivmigeiggsaeeeaaayikehvtkpvvgyiagvtapkgkrmghagaiiaggkgtadekfaaleaagvktvrsladigealktvlk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sucD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=sucD]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

sucD

Gene Synonym(s)

ECK0717, b0729, JW0718[1], JW0718

Product Desc.

succinyl-CoA synthetase, α subunit[2][3];

Component of succinyl-CoA synthetase[2][3]

Succinyl CoA synthase alpha-subunit[4]

Product Synonyms(s)

succinyl-CoA synthetase, NAD(P)-binding, alpha subunit[1], B0729[2][1], SucD[2][1], α subunit[2][1] , ECK0717, JW0718, b0729

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sdhCDAB-sucABCD[2], OP00142, sdhCDAB, sucABCD[2], OP00143, suc

Regulation/Activity
Quick Links



        

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Notes

[back to top]


sucCD is a synthetic lethal with sucAB. SucD is down 5X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). Binds TrxA (Kumar, 2004). HT_Cmplx6_Cyt: SucC+SucD.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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