queA:Quickview: Difference between revisions

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{|   id="N49b02192f0f7e" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[queA:Gene|''queA]]'' (synonyms: ''ECK0399, b0405, JW0395, tsaA'')<ref name='LIB:Riley_2006'/>
''queA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[queA:Gene_Product(s)|QueA product]]<ref name='LIB:Riley_2006'/>: S-adenosylmethionine:tRNA ribosyltransferase-isomerase product, B0405 product, TsaA product
''ECK0399, b0405, JW0395, tsaA''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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EG10812-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
EG10812<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


S-adenosylmethionine:tRNA ribosyltransferase-isomerase; queuosine biosynthesis,<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''S-adenosylmethionine:tRNA ribosyltransferase-isomerase<ref name='LIB:Riley_2006'/>, B0405<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TsaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, QueA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0399, JW0395, b0405''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:queA|queA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:queA|queA]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=queA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10812]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000803&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=queA&loc=MG1655%3A424235..425305,W3110%3A424235..425305,DH10B%3A363566..364636,REL606%3A393434..394504,BW2952%3A326994..328064]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=326994&end=328064&gene=queA&aa=mrvtdfsfelpesliahypmpersscrllsldgptgalthgtftdlldklnpgdllvfnntrviparlfgrkasggkievlvermlddkrilahiraskapkpgaelllgddesinatmtarhgalfevefndersvldilnsighmplppyidrpdedadrelyqtvysekpgavaaptaglhfdeplleklrakgvemafvtlhvgagtfqpvrvdtiedhimhseyaevpqdvvdavlaakargnrviavgttsvrslesaaqaakndliepffddtqifiypgfqykvvdalvtnfhlpestlimlvsafagyqhtmnaykaaveekyrffsygdamfitynpqainervge]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=queA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=queA]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

queA

Gene Synonym(s)

ECK0399, b0405, JW0395, tsaA[1]

Product Desc.

EG10812[2][3]

S-adenosylmethionine:tRNA ribosyltransferase-isomerase; queuosine biosynthesis,[4]

Product Synonyms(s)

S-adenosylmethionine:tRNA ribosyltransferase-isomerase[1], B0405[2][1], TsaA[2][1], QueA[2][1] , ECK0399, JW0395, b0405

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): queA[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Asn, Asp, Tyr, and His tRNA anticodons are modified. QueA converts 7-deazaguanine (preQ1-tRNA) to epoxyqueuosine (oQ-tRNA) in the penultimate step of Q-tRNA biosynthesis. The final step to make Q-tRNA from oQ-tRNA may be a cobamide-dependent reduction, but the gene is unknown (Frey, 1988). tgt mutants lack queuosine and are have reduced survival in stationary phase. (Noguchi, 1982).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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