nth:Quickview: Difference between revisions

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{|   id="L49aeee7073940" class=" tableEdit New_Quickview_Table"


|-
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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[nth:Gene|''nth]]'' (synonyms: ''ECK1629, b1633, JW1625'')<ref name='LIB:Riley_2006'/>
''nth''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[nth:Gene_Product(s)|Nth product]]<ref name='LIB:Riley_2006'/>: DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) product, B1633 product, Endo III product
''ECK1629, b1633, JW1625''<ref name='LIB:Riley_2006'/>, JW1625''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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endonuclease III; specific for apurinic and/or apyrimidinic sites<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
endonuclease III; specific for apurinic and/or apyrimidinic sites<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Endonuclease III, DNA glycosylase/apyrimidinic (AP) lyase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)<ref name='LIB:Riley_2006'/>, B1633<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Nth<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Endo III<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1629, JW1625, b1633''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rsxABCDGE-nth|rsxABCDGE-nth]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:ydgK-rsxABCDGE-nth|ydgK-rsxABCDGE-nth]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rsxABCDGE-nth|rsxABCDGE-nth]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:ydgK-rsxABCDGE-nth|ydgK-rsxABCDGE-nth]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=nth&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10662]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000655&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=nth&loc=MG1655%3A1709547..1710182,W3110%3A1713237..1713872,DH10B%3A1800118..1800753,REL606%3A1688717..1689352,BW2952%3A1601606..1602241]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1601606&end=1602241&gene=nth&aa=mnkakrleiltrlrennphpttelnfsspfelliavllsaqatdvsvnkataklypvantpaamlelgvegvktyiktiglynskaeniiktcrilleqhngevpedraalealpgvgrktanvvlntafgwptiavdthifrvcnrtqfapgknveqveekllkvvpaefkvdchhwlilhgrytciarkprcgsciiedlceykekvdi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nth+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=nth]]&nbsp;&nbsp;


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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

nth

Gene Synonym(s)

ECK1629, b1633, JW1625[1], JW1625

Product Desc.

endonuclease III; specific for apurinic and/or apyrimidinic sites[2][3]

Endonuclease III, DNA glycosylase/apyrimidinic (AP) lyase[4]

Product Synonyms(s)

DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)[1], B1633[2][1], Nth[2][1], Endo III[2][1] , ECK1629, JW1625, b1633

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rsxABCDGE-nth[2], ydgK-rsxABCDGE-nth[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Nth is specific for damaged pyrimidine sites, particularly Thy.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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