kdpE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[kdpE:Gene|''kdpE]]'' (synonyms: ''ECK0682, b0694, JW5096'')<ref name='LIB:Riley_2006'/>
''kdpE''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[kdpE:Gene_Product(s)|KdpE product, KdpE product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B0694 product, cytoplasmic response regulator of kdp operon (transcriptional effector) product, transcriptional regulatory protein KdpE product, unphosphorylated transcriptional regulatory protein KdpE product, kdp operon transcriptional regulatory protein product, unmodified transcriptional regulatory protein KdpE product
''ECK0682, b0694, JW5096''<ref name='LIB:Riley_2006'/>, JW5096''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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KdpE transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
KdpE transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Response regulator of kdp operon, phosphorylation state and activity determined by turgor pressure via KdpD<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding response regulator in two-component regulatory system with KdpD<ref name='LIB:Riley_2006'/>, B0694<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdpE-P<SUP>asp</SUP><ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, cytoplasmic response regulator of kdp operon (transcriptional effector)<ref name='LIB:EcoCyc10.6'/>, transcriptional regulatory protein KdpE<ref name='LIB:EcoCyc10.6'/>, kdp operon transcriptional regulatory protein<ref name='LIB:EcoCyc10.6'/>, , ECK0682, JW5096, b0694''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:kdpDE|kdpDE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:kdpDE|kdpDE]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=kdpE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10517]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000510&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=kdpE&loc=MG1655%3A720956..720279,W3110%3A722155..721478,DH10B%3A773548..772871,REL606%3A703828..703151,BW2952%3A623039..623716]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=623039&end=623716&gene=kdpE&aa=mtnvlivedeqairrflrtalegdgmrvfeaetlqrglleaatrkpdliildlglpdgdgiefirdlrqwsavpvivlsarseesdkiaaldagaddylskpfgigelqarlrvalrrhsattapdplvkfsdvtvdlaarvihrgeeevhltpiefrllavllnnagkvltqrqllnqvwgpnavehshylriymghlrqkleqdparprhfitetgigyrfml]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdpE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=kdpE]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

kdpE

Gene Synonym(s)

ECK0682, b0694, JW5096[1], JW5096

Product Desc.

KdpE transcriptional activator[2][3]

Response regulator of kdp operon, phosphorylation state and activity determined by turgor pressure via KdpD[4]

Product Synonyms(s)

DNA-binding response regulator in two-component regulatory system with KdpD[1], B0694[2][1], KdpE-Pasp[2][1], cytoplasmic response regulator of kdp operon (transcriptional effector)[2], transcriptional regulatory protein KdpE[2], kdp operon transcriptional regulatory protein[2], , ECK0682, JW5096, b0694

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): kdpDE[2]

Regulation/Activity
Quick Links



        

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Notes

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KdpD phosphatase activity may be inhibited by turgor pressure, leading to an accumulation of phospho-KdpE and activation of kdpFABC transcription.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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