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{{Tab On|Quickview|rcsF}}{{Tab|Gene|rcsF}}{{Tab|Gene Product(s)|rcsF}}{{Tab|Expression|rcsF}}{{Tab|Evolution|rcsF}}{{Tab|On One Page|rcsF}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rcsF:Gene|''rcsF]]'' (synonyms: ''ECK0196, b0196, JW0192'')<ref name='LIB:Riley_2006'/>
''rcsF''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rcsF:Gene_Product(s)|RcsF product, RcsF product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: predicted outer membrane protein, signal<ref name='LIB:Riley_2006'/>, B0196<ref name='LIB:EcoCyc10.6'/>, RcsF<ref name='LIB:EcoCyc10.6'/>, RcsF-P protein<ref name='LIB:EcoCyc10.6'/>, phospho-RcsF<ref name='LIB:EcoCyc10.6'/>, phosphorylated RcsF protein<ref name='LIB:EcoCyc10.6'/>, modified RcsF protein<ref name='LIB:EcoCyc10.6'/>, RcsF protein<ref name='LIB:EcoCyc10.6'/>, unphosphorylated RcsF protein<ref name='LIB:EcoCyc10.6'/>, unmodified RcsF protein<ref name='LIB:EcoCyc10.6'/>
''ECK0196, b0196, JW0192''<ref name='LIB:Riley_2006'/>, JW0192''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RcsF--phosphorelay glucose and zinc sensor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
RcsF--phosphorelay glucose and zinc sensor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Lipoprotein that signals increased capsule synthesis; upstream of RcsCDB phoshorelay; overexpression confers mucoid phenotype and increases colanic acid capsule synthesis; restores colony formation of ftsZ84 mutants on low salt<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted outer membrane protein, signal<ref name='LIB:Riley_2006'/>, B0196<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ECK0196, JW0192, b0196''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:yaeB|yaeB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yaeB|yaeB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rcsF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11502]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001458&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rcsF&loc=MG1655%3A219995..219591,W3110%3A219995..219591,DH10B%3A194099..193695,REL606%3A222835..222431,BW2952%3A219590..219994]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=219590&end=219994&gene=rcsF&aa=mralpiclvalmlsgcsmlsrspvepvqstapqpkaepakpkapratpvriytnaeelvgkpfrdlgevsgdscqasnqdsppsiptarkrmqinaskmkanavllhscevtsgtpgcyrqavcigsalnitak]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rcsF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rcsF]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Increased synthesis of RcsF is not needed for RcsC activation, implying that RcsF undergoes modification or conformational change in response to cell surface conditions that signal increased colanic acid synthesis. First 15 aa are a type II signal peptide.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:43, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rcsF

Gene Synonym(s)

ECK0196, b0196, JW0192[1], JW0192

Product Desc.

RcsF--phosphorelay glucose and zinc sensor[2][3]

Lipoprotein that signals increased capsule synthesis; upstream of RcsCDB phoshorelay; overexpression confers mucoid phenotype and increases colanic acid capsule synthesis; restores colony formation of ftsZ84 mutants on low salt[4]

Product Synonyms(s)

predicted outer membrane protein, signal[1], B0196[2][1], ECK0196, JW0192, b0196

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaeB[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Increased synthesis of RcsF is not needed for RcsC activation, implying that RcsF undergoes modification or conformational change in response to cell surface conditions that signal increased colanic acid synthesis. First 15 aa are a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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