sucB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00364 PFAM:PF00364]
[http://pfam.janelia.org/family/PF02817 PF02817  e3 binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00198 PF00198  2-oxoacid dehydrogenases acyltransferase (catalytic domain)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00364 PF00364  Biotin-requiring enzyme]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=47005 SUPERFAMILY:47005]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51230 SUPERFAMILY:51230]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52777 SUPERFAMILY:52777]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23151:SF8 PTHR23151:SF8]
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[[EcoCyc]]
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EcoCyc:EG10980
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10980
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000969
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0973
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0002480
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010144 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000015466 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G55070 (score: 1.000; bootstrap: 99%)
  • AT4G26910 (score: 0.663)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008473 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038291 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020950 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025011 (score: 1.000; bootstrap: -1%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014023 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030326-1 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-240 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040425-241 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230198 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037891 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016718 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000335304 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000005695 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007593 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Mus musculus

  • MGI:1926170 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q6K9D8 (score: 1.000; bootstrap: 99%)
  • Q7XVM2 (score: 0.539)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000007349 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000007298 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR148C (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC7765c (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000140240 (score: 1.000; bootstrap: 99%)
  • NEWSINFRUP00000141270 (score: 0.560)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00032331001 (score: 1.000; bootstrap: 99%)
  • GSTENP00032333001 (score: 0.830)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000029054 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

SUCB

From SHIGELLACYC

E. coli O157

SUCB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02817 e3 binding domain

Pfam (EcoliWiki Page)

PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain)

Pfam (EcoliWiki Page)

PF00364 Biotin-requiring enzyme

Superfamily (EcoliWiki Page)

SUPERFAMILY:47005

Superfamily (EcoliWiki Page)

SUPERFAMILY:51230

Superfamily (EcoliWiki Page)

SUPERFAMILY:52777

Panther (EcoliWiki Page)

PTHR23151:SF8

EcoCyc

EcoCyc:EG10980

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10980

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000969

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0973

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002480

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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