dkgB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00248 PFAM:PF00248]
[http://pfam.janelia.org/family/PF00248 PF00248 Aldo/keto reductase family]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51430 SUPERFAMILY:51430]
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[[EcoCyc]]
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EcoCyc:EG11648
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11648
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001592
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1601
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000692
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:30, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014666 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000024086 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000014044 (score: 0.832)
  • ENSBTAP00000023326 (score: 0.830)
  • ENSBTAP00000028488 (score: 0.826)
  • ENSBTAP00000023297 (score: 0.781)
  • ENSBTAP00000023338 (score: 0.742)
  • ENSBTAP00000030543 (score: 0.719)
  • ENSBTAP00000039157 (score: 0.648)
  • ENSBTAP00000014389 (score: 0.621)
  • ENSBTAP00000026401 (score: 0.592)
  • ENSBTAP00000038801 (score: 0.559)
  • ENSBTAP00000002172 (score: 0.498)
  • ENSBTAP00000023853 (score: 0.285)
  • ENSBTAP00000016703 (score: 0.121)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035610 (score: 1.000; bootstrap: 74%)
  • WBGene00032231 (score: 0.642)
  • WBGene00030356 (score: 0.312)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00015565 (score: 1.000; bootstrap: 70%)
  • WBGene00013896 (score: 0.335)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007444 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000007446 (score: 0.418)
  • ENSCINP00000012110 (score: 0.092)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000029843 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000023835 (score: 0.543)
  • ENSRNOP00000023739 (score: 0.522)
  • ENSRNOP00000037905 (score: 0.512)
  • ENSRNOP00000042421 (score: 0.493)
  • ENSRNOP00000045355 (score: 0.491)
  • ENSRNOP00000017675 (score: 0.389)
  • ENSRNOP00000023258 (score: 0.113)
  • ENSRNOP00000038588 (score: 0.113)
  • ENSRNOP00000047783 (score: 0.095)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC26F17 (score: 1.000; bootstrap: 97%)
  • SPBC8E44 (score: 0.564)

From Inparanoid:20070104

Shigella flexneri

YAFB

From SHIGELLACYC

E. coli O157

YAFB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00248 Aldo/keto reductase family

Superfamily (EcoliWiki Page)

SUPERFAMILY:51430

EcoCyc

EcoCyc:EG11648

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11648

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001592

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1601

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000692

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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