baeR:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
touch
 
(19 intermediate revisions by 3 users not shown)
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}   
<noinclude>{{TabsTop}}   
{{Tab On|Quickview|baeR}}{{Tab|Gene|baeR}}{{Tab|Gene Product(s)|baeR}}{{Tab|Expression|baeR}}{{Tab|Evolution|baeR}}{{Tab|On One Page|baeR}}{{TabsBottom}}
{{Tab On|Quickview|baeR}}{{Tab|Gene|baeR}}{{Tab|Gene Product(s)|baeR}}{{Tab|Expression|baeR}}{{Tab|Evolution|baeR}}{{Tab|On One Page|baeR}}{{TabsBottom}}
{|
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79..D469f90845d6f5-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5911.W49aee0ee8b441-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|{{Prettytable}}
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|   id="W49aee0ee8b441"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[baeR:Gene|''baeR]]'' (synonyms: ''ECK2075, b2079, JW2064'')<ref name='LIB:Riley_2006'/>
''baeR''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[baeR:Gene_Product(s)|BaeR product, BaeR product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: DNA-binding response regulator in two-component regulatory system with BaeS<ref name='LIB:Riley_2006'/>, B2079<ref name='LIB:EcoCyc10.6'/>, BaeR<ref name='LIB:EcoCyc10.6'/>, BaeR-P<SUP>asp</SUP><ref name='LIB:EcoCyc10.6'/>, transcriptional regulatory protein BaeR<ref name='LIB:EcoCyc10.6'/>, unphosphorylated transcriptional regulatory protein BaeR<ref name='LIB:EcoCyc10.6'/>, unmodified transcriptional regulatory protein BaeR<ref name='LIB:EcoCyc10.6'/>
''ECK2075, b2079, JW2064''<ref name='LIB:Riley_2006'/>, JW2064''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
BaeR transcriptional regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
DNA-binding response regulator in two-component regulatory system with BaeS<ref name='LIB:Riley_2006'/>
 


Response regulator for mdtABCD, acrD and spy<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''B2079, ECK2075, JW2064, b2079''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:txn_units:mdtABCD-baeSR|mdtABCD-baeSR]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:baeSR|baeSR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:mdtABCD-baeSR|mdtABCD-baeSR]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:baeSR|baeSR]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..D469f90845d6f5&page=&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=baeR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11618]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001566&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=baeR&loc=MG1655%3A2162300..2163022,W3110%3A2166413..2167135,REL606%3A2097384..2098106,DH10B%3A2253308..2254030,BW2952%3A2054783..2055505]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2054783&end=2055505&gene=baeR&aa=mtelpidentprilivedepklgqllidylraasyaptlishgdqvlpyvrqtppdlilldlmlpgtdgltlcreirrfsdipivmvtakieeidrllgleigaddyickpysprevvarvktilrrckpqrelqqqdaespliidegrfqaswrgkmldltpaefrllktlshepgkvfsreqllnhlyddyrvvtdrtidshiknlrrklesldaeqsfiravygvgyrweadacriv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=baeR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=baeR]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.5911.W49aee0ee8b441&page=5911&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..D469f90845d6f5-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5911.W49aee0ee8b441--></protect>
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
==Notes==
===Notes===
{{BacktoTop}}
 
Confers novobiocin and deoxycholate resistance via activation of mdtABCD and acrD transcription.  BaeRS multicopy suppresses envZ and phoR/creC mutations.  Spy is induced by envelope stress, dependent on both CpxR and BaeSR.<ref name='LIB:EcoGene'/>
 




<noinclude>
<noinclude>
==References==
==References==
{{BacktoTop}}
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:52, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

baeR

Gene Synonym(s)

ECK2075, b2079, JW2064[1], JW2064

Product Desc.

DNA-binding response regulator in two-component regulatory system with BaeS[1]

Response regulator for mdtABCD, acrD and spy[2]

Product Synonyms(s)

B2079, ECK2075, JW2064, b2079

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mdtABCD-baeSR[3], baeSR[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Confers novobiocin and deoxycholate resistance via activation of mdtABCD and acrD transcription. BaeRS multicopy suppresses envZ and phoR/creC mutations. Spy is induced by envelope stress, dependent on both CpxR and BaeSR.[2]



References

[back to top]


  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=baeR:Quickview&oldid=1397650"