zupT:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02535 PFAM:PF02535]
[http://pfam.janelia.org/family/PF02535 PF02535 ZIP Zinc transporter]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11065:SF5 PTHR11065:SF5]
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[[EcoCyc]]
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EcoCyc:EG11167
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11167
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001150
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1155
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0009977
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:35, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000021526 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000029396 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G20870 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000025078 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00033428 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019077 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006543 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018239 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-3023 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2090 (score: 0.252)
  • ZDB-GENE-040426-1157 (score: 0.252)
  • ZDB-GENE-030616-17 (score: 0.052)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218806 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033665 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12104-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007021 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348477 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000018647 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008129 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Mus musculus

  • MGI:1917056 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Oryza gramene

  • Q6H7N1 (score: 1.000; bootstrap: 99%)
  • Q6Z1Z9 (score: 0.539)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000042260 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000050117 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC1269 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000181884 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003930001 (score: 1.000; bootstrap: 100%)
  • GSTENP00016891001 (score: 0.290)
  • GSTENP00031769001 (score: 0.149)
  • GSTENP00019943001 (score: 0.131)
  • GSTENP00032551001 (score: 0.115)
  • GSTENP00002880001 (score: 0.109)
  • GSTENP00028573001 (score: 0.095)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000002905 (score: 1.000; bootstrap: 51%)
  • ENSXETP00000036765 (score: 0.192)
  • ENSXETP00000032740 (score: 0.136)
  • ENSXETP00000020960 (score: 0.124)
  • ENSXETP00000043929 (score: 0.077)
  • ENSXETP00000046134 (score: 0.070)

From Inparanoid:20070104

Shigella flexneri

YGIE

From SHIGELLACYC

E. coli O157

YGIE

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02535 ZIP Zinc transporter

Panther (EcoliWiki Page)

PTHR11065:SF5

EcoCyc

EcoCyc:EG11167

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11167

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001150

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1155

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009977

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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