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{{Tab On|Quickview|yebR}}{{Tab|Gene|yebR}}{{Tab|Gene Product(s)|yebR}}{{Tab|Expression|yebR}}{{Tab|Evolution|yebR}}{{Tab|On One Page|yebR}}{{TabsBottom}}
{{Tab On|Quickview|msrC}}{{Tab|Gene|msrC}}{{Tab|Gene Product(s)|msrC}}{{Tab|Expression|msrC}}{{Tab|Evolution|msrC}}{{Tab|On One Page|msrC}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yebR:Gene|''yebR]]'' (synonyms: ''ECK1831, b1832, JW1821'')<ref name='LIB:Riley_2006'/>
''msrC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yebR:Gene_Product(s)|YebR product]]<ref name='LIB:Riley_2006'/>: conserved protein<ref name='LIB:Riley_2006'/>, B1832<ref name='LIB:EcoCyc10.6'/>, YebR<ref name='LIB:EcoCyc10.6'/>
''ECK1831, b1832, JW1821''<ref name='LIB:Riley_2006'/>, yebR, JW1821''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Free methionine-(R)-sulfoxide reductase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''conserved protein<ref name='LIB:Riley_2006'/>, B1832<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YebR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , MsrC, ECK1831, JW1821, b1832''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:yebR|yebR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yebR|yebR]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=msrC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7005]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003592&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=msrC&loc=MG1655%3A1914206..1913655,W3110%3A1917896..1917345,DH10B%3A2004777..2004226,REL606%3A1894759..1894208,BW2952%3A1805714..1806211]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1805714&end=1806211&gene=msrC&aa=mliligwqiqvrqpsdyimnktefyadlnrdfnalmagetsflatlantsallyerltdinwagfylleddtlvlgpfqgkiacvripvgrgvcgtavarnqvqriedvhvfdghiacdaasnseivlplvvknqiigvldidstvfgrftdedeqglrqlvaqlekvlattdykkffasvag]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=msrC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=msrC]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Multiple alignment and RBS predictions support the annotation of native YebR as a 165 aa protein. A fully functional enzyme was translated efficiently initiating at this start site using a clone that also expressed a longer version with an N-terminal His-tag extension (Lin, 2007). Contains GAF domain. UPF0067 and COG1956 first functional member.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

msrC

Gene Synonym(s)

ECK1831, b1832, JW1821[1], yebR, JW1821

Product Desc.

conserved protein[2][3]

Free methionine-(R)-sulfoxide reductase[4]

Product Synonyms(s)

conserved protein[1], B1832[2][1], YebR[2][1] , MsrC, ECK1831, JW1821, b1832

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yebR[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Multiple alignment and RBS predictions support the annotation of native YebR as a 165 aa protein. A fully functional enzyme was translated efficiently initiating at this start site using a clone that also expressed a longer version with an N-terminal His-tag extension (Lin, 2007). Contains GAF domain. UPF0067 and COG1956 first functional member.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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