nikR:Quickview: Difference between revisions

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{|   id="F49aeee1fa8e34" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[nikR:Gene|''nikR]]'' (synonyms: ''ECK3465, b3481, JW3446, yhhG'')<ref name='LIB:Riley_2006'/>
''nikR''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[nikR:Gene_Product(s)|NikR product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional repressor, Ni-binding product, B3481 product, YhhG product, nickel-responsive transcriptional regulator product
''ECK3465, b3481, JW3446, yhhG''<ref name='LIB:Riley_2006'/>, yhhG''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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NikR<ref name='LIB:EcoCyc10.6'/> DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:EcoCyc11.1'/>  
NikR<ref name='LIB:EcoCyc10.6'/>; DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:EcoCyc11.1'/>


Nickel-responsive regulator of the nik operon; homodimer<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional repressor, Ni-binding<ref name='LIB:Riley_2006'/>, B3481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhhG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, nickel-responsive transcriptional regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NikR<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK3465, JW3446, yhhG, b3481''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:nikABCDER|nikABCDER]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nikR|nikR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:nikABCDER|nikABCDER]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:nikR|nikR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=nikR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11519]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001473&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=nikR&loc=MG1655%3A3616611..3617012,W3110%3A4021827..4021426,REL606%3A3549276..3549677,DH10B%3A3714356..3714757,BW2952%3A3505105..3505506]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3505105&end=3505506&gene=nikR&aa=mqrvtitldddlletldslsqrrgynnrseairdilrsalaqeatqqhgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhghlqclpked]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nikR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=nikR]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
ACT-like domain (Grant, 2006).<ref name='LIB:EcoGene'/>




Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

nikR

Gene Synonym(s)

ECK3465, b3481, JW3446, yhhG[1], yhhG

Product Desc.

NikR[2]; DNA-binding transcriptional repressor, Ni-binding[3]

Nickel-responsive regulator of the nik operon; homodimer[4]

Product Synonyms(s)

DNA-binding transcriptional repressor, Ni-binding[1], B3481[2][1], YhhG[2][1], nickel-responsive transcriptional regulator[2][1], NikR[3][1] , ECK3465, JW3446, yhhG, b3481

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nikABCDER[2], nikR[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ACT-like domain (Grant, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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