yggG:Quickview: Difference between revisions

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{|   id="Z49b030d69782a" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yggG:Gene|''yggG]]'' (synonyms: ''ECK2931, b2936, JW2903'')<ref name='LIB:Riley_2006'/>
''yggG''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yggG:Gene_Product(s)|YggG product]]<ref name='LIB:Riley_2006'/>: predicted peptidase product, B2936 product
''ECK2931, b2936, JW2903''<ref name='LIB:Riley_2006'/>, JW2903''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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predicted peptidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted peptidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Heat shock protein binds Era; putative metalloprotease lipoprotein; Cys in lipobox conserved; M48 family<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted peptidase<ref name='LIB:Riley_2006'/>, B2936<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2931, JW2903, b2936''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yggG|yggG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yggG|yggG]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yggG&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yggG&loc=MG1655%3A3079935..3080693,W3110%3A3080569..3081327,REL606%3A2967664..2968422,DH10B%3A3175004..3175762,BW2952%3A2967083..2967841]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2967083&end=2967841&gene=yggG&aa=mlaccaiyspvrcafpyteterrftckrrifriiltlcgrenmkirallvamsvatvltgcqnmdsngllssgaeafqayslsdaqvktlsdqacqemdskatiapanseyakrlttianalgnningqpvnykvymakdvnafamangcirvysglmdmmtdneveavighemghvalghvkkgmqvalgtnavrvaaasaggivgslsqsqlgnlgeklvnsqfsqrqeaeaddysydllrqrgispaglatsfeklakleegrqssmfddhpasaeraqhirdrmsadgik]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yggG+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yggG]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
The heat shock protein YggG binds Era and mitigates the deleterious effect of overproducing mutant Era-1 protein (Huang, 2007). htpX, yggG, yfgC and ycaL are paralogs. Gene disruption does not cause growth defect (unpublished data, Y. Akiyama, cited in Sakoh, 2005). First 18 aa are predicted to be a type II signal peptide.<ref name='LIB:EcoGene'/>




Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yggG

Gene Synonym(s)

ECK2931, b2936, JW2903[1], JW2903

Product Desc.

predicted peptidase[2][3]

Heat shock protein binds Era; putative metalloprotease lipoprotein; Cys in lipobox conserved; M48 family[4]

Product Synonyms(s)

predicted peptidase[1], B2936[2][1], YggG[2][1] , ECK2931, JW2903, b2936

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yggG[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The heat shock protein YggG binds Era and mitigates the deleterious effect of overproducing mutant Era-1 protein (Huang, 2007). htpX, yggG, yfgC and ycaL are paralogs. Gene disruption does not cause growth defect (unpublished data, Y. Akiyama, cited in Sakoh, 2005). First 18 aa are predicted to be a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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