truD:Quickview: Difference between revisions

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{|   id="S49b0275899a36" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[truD:Gene|''truD]]'' (synonyms: ''ECK2740, b2745, JW2715, ygbO'')<ref name='LIB:Riley_2006'/>
''truD''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[truD:Gene_Product(s)|TruD product]]<ref name='LIB:Riley_2006'/>: pseudoruidine synthase product, B2745 product, YgbO product
''ECK2740, b2745, JW2715, ygbO''<ref name='LIB:Riley_2006'/>, ygbO''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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tRNA pseudouridine 13 synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
tRNA pseudouridine 13 synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


tRNA(Glu) U13 pseudouridine synthase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''pseudoruidine synthase<ref name='LIB:Riley_2006'/>, B2745<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TruD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2740, JW2715, ygbO, b2745''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s):   
transcription unit(s):   
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=truD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7422]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003987&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=truD&loc=MG1655%3A2869326..2868277,W3110%3A2869960..2868911,DH10B%3A2961868..2960819,REL606%3A2765116..2766165,BW2952%3A2754089..2755138]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2754089&end=2755138&gene=truD&aa=miefdnltylhgkpqgtgllkanpedfvvvedlgfepdgegehilvrilkngcntrfvadalakflkiharevsfagqkdkhavteqwlcarvpgkempdlsafqlegcqvleyarhkrklrlgalkgnaftlvlrevsnrddveqrlidicvkgvpnyfgaqrfgiggsnlqgaqrwaqtntpvrdrnkrsfwlsaarsalfnqivaerlkkadvnqvvdgdalqlagrgswfvatteelaelqrrvndkelmitaalpgsgewgtqrealafeqaavaaetelqallvrekveaarramllypqqlswnwwddvtveirfwlpagsfatsvvrelinttgdyahiae]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=truD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=truD]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}




Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

truD

Gene Synonym(s)

ECK2740, b2745, JW2715, ygbO[1], ygbO

Product Desc.

tRNA pseudouridine 13 synthase[2][3]

tRNA(Glu) U13 pseudouridine synthase[4]

Product Synonyms(s)

pseudoruidine synthase[1], B2745[2][1], YgbO[2][1], TruD[2][1] , ECK2740, JW2715, ygbO, b2745

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s):

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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