ddpB:Quickview: Difference between revisions

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{|   id="F49aee366235a9" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ddpB:Gene|''ddpB]]'' (synonyms: ''ECK1480, b1486, JW1481, yddR'')<ref name='LIB:Riley_2006'/>
''ddpB''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ddpB:Gene_Product(s)|DdpB product]]<ref name='LIB:Riley_2006'/>: D-ala-D-ala transporter subunit product, membrane component of ABC superfamily product, B1486 product, YddR product
''ECK1480, b1486, JW1481, yddR''<ref name='LIB:Riley_2006'/>, yddR''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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YddR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
YddR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:YddO/YddP/YddQ/YddR/YddS ABC transporter|YddO/YddP/YddQ/YddR/YddS ABC transporter]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:YddO/YddP/YddQ/YddR/YddS ABC transporter|YddO/YddP/YddQ/YddR/YddS ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


D,D-dipeptide permease system, membrane translocase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''D-ala-D-ala transporter subunit<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B1486<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YddR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DdpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1480, JW1481, yddR, b1486''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ddpXABCDF|ddpXABCDF]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ddpXABCDF|ddpXABCDF]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ddpB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6780]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003369&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ddpB&loc=MG1655%3A1558953..1557931,W3110%3A1562643..1561621,DH10B%3A1649548..1648526,REL606%3A1533845..1534867,BW2952%3A1449990..1451012]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1449990&end=1451012&gene=ddpB&aa=mtfwsilrqrcwglvlvvagvcvitfiishlipgdparllagdrasdaivenirqqlgldqplyvqfyryvsdlfhgdlgtsirtgrpvleelriffpatlelafgalllalligiplgilsavwrnrwldhlvrimaitgistpafwlglgvivlfyghlqilpgggrlddwldppthvtgfylldallegngevffnalqhlilpaltlafvhlgivarqirsamleqlsedyirtarasglpgwyivlcyalpnalipsitvlglalgdllygavltetvfawpgmgawvvtsiqaldfpavmgfavvvsfayvlvnlvvdllylwidprigrggge]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ddpB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ddpB]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
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===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
RpoS regulon.<ref name='LIB:EcoGene'/>




Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ddpB

Gene Synonym(s)

ECK1480, b1486, JW1481, yddR[1], yddR

Product Desc.

YddR[2][3];

Component of YddO/YddP/YddQ/YddR/YddS ABC transporter[2][3]

D,D-dipeptide permease system, membrane translocase[4]

Product Synonyms(s)

D-ala-D-ala transporter subunit[1], membrane component of ABC superfamily[1], B1486[2][1], YddR[2][1], DdpB[2][1] , ECK1480, JW1481, yddR, b1486

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ddpXABCDF[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


RpoS regulon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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