ycaL:Quickview: Difference between revisions
Jump to navigation
Jump to search
imported>Wikientrybot Move help links into the <above> tag inside templates. |
touch |
||
| (12 intermediate revisions by 2 users not shown) | |||
| Line 17: | Line 17: | ||
|} | |} | ||
</noinclude> | </noinclude> | ||
<!--box uid= | <protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3563.D49b02b1f12a14--> | ||
<!-- | <!-- | ||
****************************************************************************************** | ****************************************************************************************** | ||
| Line 24: | Line 24: | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| | {| id="D49b02b1f12a14" class=" tableEdit New_Quickview_Table" | ||
|- | |- | ||
!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''ycaL'' | |||
|- | |- | ||
!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK0900, b0909, JW0892''<ref name='LIB:Riley_2006'/>, JW0892'' | |||
|- | |- | ||
!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
putative heat shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | putative heat shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
Putative metalloprotease lipoprotein, function unknown; M48 family<ref name='LIB:EcoGene'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | |||
''predicted peptidase with chaperone function<ref name='LIB:Riley_2006'/>, B0909<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcaL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0900, JW0892, b0909'' | |||
|- | |||
!align=left {{table_heading_style}} |Function from GO | |||
|| | |||
<GO_nr /> | |||
|- | |||
!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
|| | || | ||
|- | |- | ||
!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:ycaL|ycaL]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ycaL|ycaL]]<ref name='LIB:EcoCyc10.6'/> | ||
| Line 51: | Line 60: | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ycaL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6470]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003070&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ycaL&loc=MG1655%3A959487..960251,W3110%3A960686..961450,DH10B%3A1013415..1014179,REL606%3A977356..978120,BW2952%3A862455..863219]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=862455&end=863219&gene=ycaL&aa=minqrmihmkntklllaiatsaalltgcqnthgidtnmaissglnaykaatlsdadakaianqgcaemdsgnqvasksskygkrlakiakalgnningtpvnykvymtsdvnawamangcvrvysglmdmmndneiegvlghelghvalghslaemkasyaivaardaisatsgvasqlsrsqlgdiaegainakysrdkeseaddfsfdllkkrgistqglvgsfetlasldggrtqsmfdshppsteraqhirdriasgk]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ycaL+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ycaL]] | |||
|-class= | |- class="tableEdit_footer" | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id= | |<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.3563.D49b02b1f12a14&page=3563&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> || | ||
|} | |} | ||
<!--box uid= | <!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3563.D49b02b1f12a14--></protect> | ||
{{Quickview_table_help}} | {{Quickview_table_help}} | ||
<protect><!--Quickview_notes--></protect> | <protect><!--Quickview_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
Gene disruption does not cause growth defect, unpublished data, Y. Akiyama, cited in Sakoh, 2005. First 19 aa are a type II signal peptide.<ref name='LIB:EcoGene'/> | |||
Latest revision as of 21:44, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ycaL |
|---|---|
| Gene Synonym(s) |
ECK0900, b0909, JW0892[1], JW0892 |
| Product Desc. |
putative heat shock protein[2][3] Putative metalloprotease lipoprotein, function unknown; M48 family[4] |
| Product Synonyms(s) |
predicted peptidase with chaperone function[1], B0909[2][1], YcaL[2][1] , ECK0900, JW0892, b0909 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Gene disruption does not cause growth defect, unpublished data, Y. Akiyama, cited in Sakoh, 2005. First 19 aa are a type II signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.