yacC:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
touch
 
(12 intermediate revisions by 3 users not shown)
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|yacC}}{{Tab|Gene|yacC}}{{Tab|Gene Product(s)|yacC}}{{Tab|Expression|yacC}}{{Tab On|Evolution|yacC}}{{Tab|On One Page|yacC}}{{TabsBottom}}
{{Tab|Quickview|yacC}}{{Tab|Gene|yacC}}{{Tab|Gene Product(s)|yacC}}{{Tab|Expression|yacC}}{{Tab On|Evolution|yacC}}{{Tab|On One Page|yacC}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74-->
{{BacktoTop}}
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44229.W46ab99b0aa0d4-->
{|class = 'sortable' {{Prettytable}} id='86481'
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|  id="W46ab99b0aa0d4"  class=" tableEdit Evolution_homologs_table" 
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
|-
|-  
|
|
''Shigella flexneri''   
''Shigella flexneri''   
Line 24: Line 39:
|
|
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|
''E. coli'' O157
|
YACC
|
From ECOO157CYC
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.44229.W46ab99b0aa0d4&page=44229&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44229.W46ab99b0aa0d4-->
{{Evolution_homologs_table_help}}


===Do-It-Yourself Web Tools===
<protect><!--Families_notes--></protect>
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_414664&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
 
<protect><!--Homology_notes--></protect>
===Notes===
===Notes===


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74-->
{{BacktoTop}}
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.44229.A4c604ed971a25-->
{|class = 'sortable' {{Prettytable}} id='86481'
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->{{Evolution_families_table_help}}
{|  id="A4c604ed971a25"  class=" tableEdit Evolution_families_table" 
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!|Database!!Accession!!Notes
|-
|-  
|
''Shigella flexneri'' 
|
|
YACC
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
|
From SHIGELLACYC
[http://pfam.janelia.org/family/PF09691 PF09691  Bacterial chaperone lipoprotein (PulS_OutS)]
|-
|
|
''E. coli'' O157
|
 
YACC
|- class="tableEdit_footer"
|
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.44229.A4c604ed971a25&page=44229&pagename={{FULLPAGENAMEE}}&type=0&template=Evolution_families_table edit table]</span> || ||
From ECOO157CYC
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46a06a3af0d74-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.44229.A4c604ed971a25--></protect>
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
===Notes===
===Notes===




==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44229.F46a7e9c2df26f-->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|  id="F46a7e9c2df26f"  class=" tableEdit Links_table" 
|- {{table_heading_style}}
!|Name!!URL!!Comments
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.44229.F46a7e9c2df26f&page=44229&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44229.F46a7e9c2df26f-->
 
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 20:03, 16 August 2011

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Shigella flexneri

YACC

From SHIGELLACYC

E. coli O157

YACC

From ECOO157CYC

edit table


Notes

Families

[back to top]


See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes

Pfam (EcoliWiki Page)

PF09691 Bacterial chaperone lipoprotein (PulS_OutS)


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=yacC:Evolution&oldid=1298189"