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{{Tab On|Quickview|ymfK}}{{Tab|Gene|ymfK}}{{Tab|Gene Product(s)|ymfK}}{{Tab|Expression|ymfK}}{{Tab|Evolution|ymfK}}{{Tab|On One Page|ymfK}}{{TabsBottom}}
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|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ymfK:Gene|''ymfK]]'' (synonyms: ''ECK1131, b1145, JW1131'')<ref name='LIB:Riley_2006'/>
''cohE''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ymfK:Gene_Product(s)|YmfK product]]<ref name='LIB:Riley_2006'/>: e14 prophage; repressor protein phage e14<ref name='LIB:Riley_2006'/>, B1145<ref name='LIB:EcoCyc10.6'/>, YmfK<ref name='LIB:EcoCyc10.6'/>
''ECK1131, b1145, JW1131'', ymfK<ref name='LIB:Riley_2006'/>, JW1131, ymfK''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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putative phage repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
putative phage repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Putative CI-like repressor, e14 prophage<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''e14 prophage; repressor protein phage e14<ref name='LIB:Riley_2006'/>, B1145<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CohE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1131, JW1131, ymfK, b1145''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ymfK|ymfK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cohE|cohE]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ymfK&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6589]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003184&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ymfK&loc=MG1655%3A1202156..1201482,W3110%3A1204510..1203836]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1204510&end=1203836&gene=ymfK&aa=mktihdirrsnarklrdgvggnssfatmidreptqtsrfmgdgatknigdsmarhiekcfdlpvgwldqehqttnitkkpdvsitnkqitlvpviswvqagawkevgysevdlstaetypcpvpcgemtyilrvigdsmideyrpgdmifvdpevpachgddvialmhdtgettfkrliedgtqrylkalnpnwpepyikingncsiigtvifsgkprrykika]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ymfK+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ymfK]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
YmfK is a V4I variant of a putative CI-like repressor protein from Shigella flexneri bacteriophage V.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:39, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cohE

Gene Synonym(s)

ECK1131, b1145, JW1131, ymfK[1], JW1131, ymfK

Product Desc.

putative phage repressor[2][3]

Putative CI-like repressor, e14 prophage[4]

Product Synonyms(s)

e14 prophage; repressor protein phage e14[1], B1145[2][1], CohE[2][1] , ECK1131, JW1131, ymfK, b1145

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cohE[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YmfK is a V4I variant of a putative CI-like repressor protein from Shigella flexneri bacteriophage V.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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