ybiV:Quickview: Difference between revisions

Latest revision as of 21:44, 27 May 2013

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Quickview

Gene

Standard Name	ybiV
Gene Synonym(s)	ECK0812, b0822, JW0806, supH^[1]^[2], supH
Product Desc.	sugar phosphatase^[2]^[3] Sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P; phosphoramidase and acetyl phosphatase; HAD12^[4]
Product Synonyms(s)	predicted hydrolase^[1], YbiV^[2]^[1], B0822^[2]^[1], SupH^[2]^[1] , ECK0812, JW0806, supH, b0822
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): ybiV^[2]
Regulation/Activity
Quick Links
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Notes

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HAD superfamily. The natural substrate(s) and physiological role of YbiV is unknown. In vitro activities demonstrated by Kuznetsova et al. (2005, 2006).^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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[2]

[3]

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 <noinclude>{{TabsTop}}
 {{Tab On|Quickview|ybiV}}{{Tab|Gene|ybiV}}{{Tab|Gene Product(s)|ybiV}}{{Tab|Expression|ybiV}}{{Tab|Evolution|ybiV}}{{Tab|On One Page|ybiV}}{{TabsBottom}}
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+{|   id="R49b02ae9d16d6"  class=" tableEdit New_Quickview_Table"
 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[ybiV:Gene|''ybiV]]'' (synonyms: ''ECK0812, b0822, JW0806, supH'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
+''ybiV''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[ybiV:Gene_Product(s)|YbiV product]]<ref name='LIB:Riley_2006'/>: predicted hydrolase<ref name='LIB:Riley_2006'/>, YbiV<ref name='LIB:EcoCyc10.6'/>, B0822<ref name='LIB:EcoCyc10.6'/>, SupH<ref name='LIB:EcoCyc10.6'/>
+''ECK0812, b0822, JW0806, supH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, supH''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
 sugar phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P; phosphoramidase and acetyl phosphatase; HAD12<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''predicted hydrolase<ref name='LIB:Riley_2006'/>, YbiV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0822<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SupH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0812, JW0806, supH, b0822''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
-transcription unit(s): [[:Category:txn_units:ybiV|ybiV]]<ref name='LIB:EcoCyc10.6'/>
+transcription unit(s): [[:Category:Txn_unit:ybiV|ybiV]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybiV&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6425]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003025&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybiV&loc=MG1655%3A859251..858436,W3110%3A860450..859635,DH10B%3A913179..912364,REL606%3A852580..851765,BW2952%3A761404..762219]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=761404&end=762219&gene=ybiV&aa=msvkvivtdmdgtflndaktynqprfmaqyqelkkrgikfvvasgnqyyqlisffpelkdeisfvaengalvyehgkqlfhgeltrhesrivigellkdkqlnfvacglqsayvsenapeafvalmakhyhrlkpvkdyqeiddvlfkfslnlpdeqiplvidklhvaldgimkpvtsgfgfidliipglhkangisrllkrwdlspqnvvaigdsgndaemlkmarysfamgnaaenikqiaryatddnnhegalnviqavldntspfns]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybiV+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybiV]]&nbsp;&nbsp;
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 <protect><!--Quickview_notes--></protect>
-==Notes==
+===Notes===
+{{BacktoTop}}
+HAD superfamily. The natural substrate(s) and physiological role of YbiV is unknown. In vitro activities demonstrated by Kuznetsova et al. (2005, 2006).<ref name='LIB:EcoGene'/>
 <noinclude>
 ==References==
+{{BacktoTop}}
 <references/>
 </noinclude>

ybiV:Quickview: Difference between revisions

Latest revision as of 21:44, 27 May 2013

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