sdhC:Quickview: Difference between revisions

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{{Tab On|Quickview|sdhC}}{{Tab|Gene|sdhC}}{{Tab|Gene Product(s)|sdhC}}{{Tab|Expression|sdhC}}{{Tab|Evolution|sdhC}}{{Tab|On One Page|sdhC}}{{TabsBottom}}
{{Tab On|Quickview|sdhC}}{{Tab|Gene|sdhC}}{{Tab|Gene Product(s)|sdhC}}{{Tab|Expression|sdhC}}{{Tab|Evolution|sdhC}}{{Tab|On One Page|sdhC}}{{TabsBottom}}
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[sdhC:Gene|''sdhC]]'' (synonyms: ''ECK0710, b0721, JW0711, cybA, dhsC, cybL'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''sdhC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[sdhC:Gene_Product(s)|SdhC product]]<ref name='LIB:Riley_2006'/>: succinate dehydrogenase, membrane subunit, binds cytochrome b556<ref name='LIB:Riley_2006'/>, B0721<ref name='LIB:EcoCyc10.6'/>, DhsC<ref name='LIB:EcoCyc10.6'/>, CybA<ref name='LIB:EcoCyc10.6'/>, SdhC<ref name='LIB:EcoCyc10.6'/>, large subunit of cytochrome b<sub>556</sub><ref name='LIB:EcoCyc10.6'/>, CybL<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:membrane-bound subcomplex of succinate dehydrogenase|membrane-bound subcomplex of succinate dehydrogenase]]<ref name='LIB:EcoCyc11.1'/>, [[:Category:Complex:succinate dehydrogenase|succinate dehydrogenase]]<ref name='LIB:EcoCyc11.1'/>
''ECK0710, b0721, JW0711, cybA, dhsC, cybL''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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succinate dehydrogenase membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
succinate dehydrogenase membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:membrane-bound subcomplex of succinate dehydrogenase|membrane-bound subcomplex of succinate dehydrogenase]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:succinate dehydrogenase|succinate dehydrogenase]]<ref name='LIB:EcoCyc11.1'/>


Succinate dehydrogenase (SQR) cytochrome b556; membrane anchor; succinate:ubiquinone oxidoreductase (SQR); complex II of aerobic respiration<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''succinate dehydrogenase, membrane subunit, binds cytochrome b556<ref name='LIB:Riley_2006'/>, B0721<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DhsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CybA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SdhC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, large subunit of cytochrome b<sub>556</sub><ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CybL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cybA, ECK0710, JW0711, b0721''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB, sucABCD
transcription unit(s): [[:Category:Txn_unit:sdhCDAB-sucABCD|sdhCDAB-sucABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00142, sdhCDAB  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=sdhC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10933]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000922&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=sdhC&loc=MG1655%3A754400..754789,W3110%3A755599..755988,DH10B%3A806992..807381,REL606%3A735968..736357,BW2952%3A657160..657549]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=657160&end=657549&gene=sdhC&aa=mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlsllagvlvw]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sdhC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=sdhC]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
The sdhABCD operon is negatively regulated by ryhB RNA as part of indirect positive regulation by Fur.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

sdhC

Gene Synonym(s)

ECK0710, b0721, JW0711, cybA, dhsC, cybL[1][2]

Product Desc.

succinate dehydrogenase membrane protein[2][3];

Component of membrane-bound subcomplex of succinate dehydrogenase[3]; succinate dehydrogenase[3]

Succinate dehydrogenase (SQR) cytochrome b556; membrane anchor; succinate:ubiquinone oxidoreductase (SQR); complex II of aerobic respiration[4]

Product Synonyms(s)

succinate dehydrogenase, membrane subunit, binds cytochrome b556[1], B0721[2][1], DhsC[2][1], CybA[2][1], SdhC[2][1], large subunit of cytochrome b556[2][1], CybL[2][1] , cybA, ECK0710, JW0711, b0721

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sdhCDAB-sucABCD[2], OP00142, sdhCDAB

Regulation/Activity
Quick Links



        

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Notes

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The sdhABCD operon is negatively regulated by ryhB RNA as part of indirect positive regulation by Fur.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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