ybeL:Quickview: Difference between revisions

Latest revision as of 21:44, 27 May 2013

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Quickview

Gene

Standard Name	ybeL
Gene Synonym(s)	ECK0636, b0643, JW0638^[1], JW0638
Product Desc.	conserved protein^[2]; putative alpha-helical protein^[3] Function unknown^[4]
Product Synonyms(s)	conserved protein^[1], B0643^[2]^[1], YbeL^[2]^[1] , ECK0636, JW0638, b0643
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): ybeL^[2]
Regulation/Activity
Quick Links
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Notes

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A fraction of full length YbeL is naturally ssrA-tagged. YbeL may have an ATPase-related function since it appears to be distantly related to domains in the ClpB ATPase subunit and adenylate kinases (K.E.R., unpublished PSI-BLAST observations).^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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[2]

[3]

[4]

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 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[ybeL:Gene|''ybeL]]'' (synonyms: ''ECK0636, b0643, JW0638'')<ref name='LIB:Riley_2006'/>
+''ybeL''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[ybeL:Gene_Product(s)|YbeL product]]<ref name='LIB:Riley_2006'/>: conserved protein<ref name='LIB:Riley_2006'/>, B0643<ref name='LIB:EcoCyc10.6'/>, YbeL<ref name='LIB:EcoCyc10.6'/>
+''ECK0636, b0643, JW0638''<ref name='LIB:Riley_2006'/>, JW0638''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
-conserved protein<ref name='LIB:EcoCyc10.6'/>putative alpha-helical protein<ref name='LIB:EcoCyc11.1'/>
+conserved protein<ref name='LIB:EcoCyc10.6'/>; putative alpha-helical protein<ref name='LIB:EcoCyc11.1'/>
+Function unknown<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''conserved protein<ref name='LIB:Riley_2006'/>, B0643<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbeL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0636, JW0638, b0643''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
-transcription unit(s): [[:Category:txn_units:ybeL|ybeL]]<ref name='LIB:EcoCyc10.6'/>
+transcription unit(s): [[:Category:Txn_unit:ybeL|ybeL]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybeL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12851]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002400&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybeL&loc=MG1655%3A674241..674723,W3110%3A675440..675922,DH10B%3A613573..614055,DH10B%3A726833..727315,REL606%3A657602..658084,BW2952%3A577001..577483]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=577001&end=577483&gene=ybeL&aa=mnkvaqyyrelvaslserlrngerdidalveqarerviktgeltrtevdeltravrrdleefamsyeeslkeesdsvfmrvikeslwqeladitdktqlewrevfqdlnhhgvyhsgevvglgnlvcekchfhlpiytpevltlcpkcghdqfqrrpfep]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybeL+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybeL]]&nbsp;&nbsp;
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 <protect><!--Quickview_notes--></protect>
-==Notes==
+===Notes===
+{{BacktoTop}}
+A fraction of full length YbeL is naturally ssrA-tagged.   YbeL may have an ATPase-related function since it appears to be distantly related to domains in the ClpB ATPase subunit and adenylate kinases (K.E.R., unpublished PSI-BLAST observations).<ref name='LIB:EcoGene'/>
 <noinclude>
 ==References==
+{{BacktoTop}}
 <references/>
 </noinclude>

ybeL:Quickview: Difference between revisions

Latest revision as of 21:44, 27 May 2013

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