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{{Tab On|Quickview|ahpF}}{{Tab|Gene|ahpF}}{{Tab|Gene Product(s)|ahpF}}{{Tab|Expression|ahpF}}{{Tab|Evolution|ahpF}}{{Tab|On One Page|ahpF}}{{TabsBottom}}
{{Tab On|Quickview|ahpF}}{{Tab|Gene|ahpF}}{{Tab|Gene Product(s)|ahpF}}{{Tab|Expression|ahpF}}{{Tab|Evolution|ahpF}}{{Tab|On One Page|ahpF}}{{TabsBottom}}
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ahpF:Gene|''ahpF]]'' (synonyms: ''ECK0600, b0606, JW0599'')<ref name='LIB:Riley_2006'/>
''ahpF''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ahpF:Gene_Product(s)|AhpF product]]<ref name='LIB:Riley_2006'/>: alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding<ref name='LIB:Riley_2006'/>, B0606<ref name='LIB:EcoCyc10.6'/>, AhpF<ref name='LIB:EcoCyc10.6'/>, alkyl hydroperoxide reductase, F52a subunit<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:alkylhydroperoxide reductase|alkylhydroperoxide reductase]]<ref name='LIB:EcoCyc11.1'/>
''ECK0600, b0606, JW0599''<ref name='LIB:Riley_2006'/>, JW0599''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AhpF component<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
AhpF component<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:alkylhydroperoxide reductase|alkylhydroperoxide reductase]]<ref name='LIB:EcoCyc11.1'/>


Alkyl hydroperoxide reductase, subunit F; NAD(P)H:peroxiredoxin oxidoreductase, reduces AhpC; contains one FAD/monomer<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding<ref name='LIB:Riley_2006'/>, B0606<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AhpF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, alkyl hydroperoxide reductase, F52a subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0600, JW0599, b0606''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ahpF|ahpF]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:ahpCF|ahpCF]]<ref name='LIB:EcoCyc10.6'/>, OP00101, ahpC  
transcription unit(s): [[:Category:Txn_unit:ahpF|ahpF]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:ahpCF|ahpCF]]<ref name='LIB:EcoCyc10.6'/>, OP00101, ahpC  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ahpF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11385]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001352&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ahpF&loc=MG1655%3A638976..640541,W3110%3A638976..640541,DH10B%3A578308..579873,DH10B%3A691568..693133,REL606%3A621804..623369,BW2952%3A541736..543301]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=541736&end=543301&gene=ahpF&aa=mmmfkaqeinmldtnmktqlkaylekltkpveliatlddsaksaeikellaeiaelsdkvtfkednslpvrkpsflitnpgsnqgprfagsplgheftslvlallwtgghpskeaqslleqirhidgdfefetyyslschncpdvvqalnlmsvlnprikhtaidggtfqneitdrnvmgvpavfvngkefgqgrmtlteivakidtgaekraaeelnkrdaydvlivgsgpagaaaaiysarkgirtglmgerfggqildtvdienyisvpktegqklagalkvhvdeydvdvidsqsasklipaavegglhqietasgavlkarsiivatgakwrnmnvpgedqyrtkgvtycphcdgplfkgkrvavigggnsgveaaidlagivehvtllefapemkadqvlqdklrslknvdiilnaqttevkgdgskvvgleyrdrvsgdihnielagifvqigllpntnwlegavernrmgeiiidakcetnvkgvfaagdcttvpykqiiiatgegakaslsafdylirtkta]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ahpF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ahpF]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
The native AhpF from Salmonella has been N-terminally sequenced (Jacobson et al, 1989), supporting the choice of this alternate initiation codon in E. coli by inference.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ahpF

Gene Synonym(s)

ECK0600, b0606, JW0599[1], JW0599

Product Desc.

AhpF component[2][3];

Component of alkylhydroperoxide reductase[3]

Alkyl hydroperoxide reductase, subunit F; NAD(P)H:peroxiredoxin oxidoreductase, reduces AhpC; contains one FAD/monomer[4]

Product Synonyms(s)

alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding[1], B0606[2][1], AhpF[2][1], alkyl hydroperoxide reductase, F52a subunit[2][1] , ECK0600, JW0599, b0606

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ahpF[2], ahpCF[2], OP00101, ahpC

Regulation/Activity
Quick Links



        

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Notes

[back to top]


The native AhpF from Salmonella has been N-terminally sequenced (Jacobson et al, 1989), supporting the choice of this alternate initiation codon in E. coli by inference.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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