hiuH:Evolution: Difference between revisions

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{{Tab|Quickview|yedX}}{{Tab|Gene|yedX}}{{Tab|Gene Product(s)|yedX}}{{Tab|Expression|yedX}}{{Tab On|Evolution|yedX}}{{Tab|On One Page|yedX}}{{TabsBottom}}
{{Tab|Quickview|hiuH}}{{Tab|Gene|hiuH}}{{Tab|Gene Product(s)|hiuH}}{{Tab|Expression|hiuH}}{{Tab On|Evolution|hiuH}}{{Tab|On One Page|hiuH}}{{TabsBottom}}
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{|class = 'sortable' {{Prettytable}} id='210290'
{|  id="T46abceb181fca"  class=" tableEdit Evolution_homologs_table" 
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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From Inparanoid:20070104  
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''Bos taurus''   
''Bos taurus''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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From Inparanoid:20070104  
From Inparanoid:20070104  
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''Canis familiaris''   
''Canis familiaris''   
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From Inparanoid:20070104  
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''Danio rerio''   
''Danio rerio''   
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From Inparanoid:20070104  
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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From Inparanoid:20070104  
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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From Inparanoid:20070104  
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''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
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''Gallus gallus''   
''Gallus gallus''   
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''Homo sapiens''   
''Homo sapiens''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
''Rattus norvegicus''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=49472 SUPERFAMILY:49472]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10395:SF7 PTHR10395:SF7]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00576 PFAM:PF00576]
[http://pfam.janelia.org/family/PF00576 PF00576 HIUase/Transthyretin family]
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[[EcoCyc]]
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EcoCyc:G7058
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG14046
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003644
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3799
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006537
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
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__NOTOC__
__NOTOC__
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===Categories===
===Categories===
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Latest revision as of 08:33, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020773 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G58220 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000014585 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00027104 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00022808 (score: 1.000; bootstrap: 100%)
  • WBGene00011181 (score: 0.444)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000029312 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040927-14 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040926-21 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0187098 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0050016 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15578-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000000762 (score: 1.000; bootstrap: 82%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000237014 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000021922 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004016 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Mus musculus

  • MGI:1916142 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Oryza gramene

  • Q75LS2 (score: 1.000; bootstrap: 100%)
  • Q7XXQ9 (score: 0.975)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000016916 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000017121 (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC2854 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000159291 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00019814001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000042956 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Shigella flexneri

S2114

From SHIGELLACYC

E. coli O157

Z3062

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:49472

Panther (EcoliWiki Page)

PTHR10395:SF7

Pfam (EcoliWiki Page)

PF00576 HIUase/Transthyretin family

EcoCyc

EcoCyc:G7058

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14046

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003644

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3799

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006537

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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