rrrD:Quickview: Difference between revisions

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{{Tab On|Quickview|ybcS}}{{Tab|Gene|ybcS}}{{Tab|Gene Product(s)|ybcS}}{{Tab|Expression|ybcS}}{{Tab|Evolution|ybcS}}{{Tab|On One Page|ybcS}}{{TabsBottom}}
{{Tab On|Quickview|rrrD}}{{Tab|Gene|rrrD}}{{Tab|Gene Product(s)|rrrD}}{{Tab|Expression|rrrD}}{{Tab|Evolution|rrrD}}{{Tab|On One Page|rrrD}}{{TabsBottom}}
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|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybcS:Gene|''ybcS]]'' (synonyms: ''ECK0546, b0555, JW0544, lycV'')<ref name='LIB:Riley_2006'/>
''rrrD''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybcS:Gene_Product(s)|YbcS product]]<ref name='LIB:Riley_2006'/>: DLP12 prophage; predicted lysozyme<ref name='LIB:Riley_2006'/>, B0555<ref name='LIB:EcoCyc10.6'/>, YbcS<ref name='LIB:EcoCyc10.6'/>, LycV<ref name='LIB:EcoCyc10.6'/>
''ECK0546, b0555, JW0544, lycV, ybcS, arrD''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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DLP prophage, predicted lysozyme<ref name='LIB:EcoCyc10.6'/>DLP12 prophage; predicted lysozyme<ref name='LIB:EcoCyc11.1'/>
DLP prophage, predicted lysozyme<ref name='LIB:EcoCyc10.6'/>; DLP12 prophage; predicted lysozyme<ref name='LIB:EcoCyc11.1'/>
 


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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''DLP12 prophage; predicted lysozyme<ref name='LIB:Riley_2006'/>, B0555<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbcS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LycV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , RrrD, ECK0546, JW0544, ybcS, b0555''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:essD|essD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:essD-ybcS-rzpD|essD-ybcS-rzpD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:essD|essD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:essD-arrD-rzpD|essD-arrD-rzpD]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybcS&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybcS&loc=MG1655%3A576836..577333,W3110%3A576836..577333,DH10B%3A516168..516665,DH10B%3A629428..629925,REL606%3A549082..549579,BW2952%3A479596..480093]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=479596&end=480093&gene=ybcS&aa=mppslrkavaaaigggaiaiasvlitgpsgndglegvsyipykdivgvwtvchghtgkdimlgktytkaeckallnkdlatvarqinpyikvdipettrgalysfvynvgagnfrtstllrkinqgdikgacdqlrrwtyaggkqwkglmtrreierevclwgqq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybcS+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybcS]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}




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==References==
==References==
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<references/>
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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rrrD

Gene Synonym(s)

ECK0546, b0555, JW0544, lycV, ybcS, arrD[1]

Product Desc.

DLP prophage, predicted lysozyme[2]; DLP12 prophage; predicted lysozyme[3]

Product Synonyms(s)

DLP12 prophage; predicted lysozyme[1], B0555[2][1], YbcS[2][1], LycV[2][1] , RrrD, ECK0546, JW0544, ybcS, b0555

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): essD[2], essD-arrD-rzpD[2]

Regulation/Activity
Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7