phnM:Quickview: Difference between revisions

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{|   id="N49b01fd92e8a8"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[phnM:Gene|''phnM]]'' (synonyms: ''ECK4088, b4095, JW4056'')<ref name='LIB:Riley_2006'/>
''phnM''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[phnM:Gene_Product(s)|PhnM product]]<ref name='LIB:Riley_2006'/>: carbon-phosphorus lyase complex subunit product, B4095 product
''ECK4088, b4095, JW4056''<ref name='LIB:Riley_2006'/>, JW4056''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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ATP-binding component of phosphonate transport<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
ATP-binding component of phosphonate transport<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Carbon-phosphorus lyase complex subunit<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''carbon-phosphorus lyase complex subunit<ref name='LIB:Riley_2006'/>, B4095<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PhnM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4088, JW4056, b4095''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:phnCDEEFGHIJKLMNOP|phnCDEEFGHIJKLMNOP]]<ref name='LIB:EcoCyc10.6'/>, OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP  
transcription unit(s): [[:Category:Txn_unit:phnCDEEFGHIJKLMNOP|phnCDEEFGHIJKLMNOP]]<ref name='LIB:EcoCyc10.6'/>, OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=phnM&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10722]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000714&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=phnM&loc=MG1655%3A4315241..4314105,W3110%3A4321896..4320760,REL606%3A4296040..4294904,DH10B%3A4415603..4414467,BW2952%3A4252840..4253976]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4252840&end=4253976&gene=phnM&aa=miinnvklvlenevvsgslevqngeirafaesqsrlpeamdgeggwllpglielhtdnldkfftprpkvdwpahsamsshdalmvasgittvldavaigdvrdggdrlenlekminaieetqkrgvnraehrlhlrcelphhttlplfeklvqrepvtlvslmdhspgqrqfanrekyreyyqgkysltdaqmqqyeeeqlalaarwsqpnresiaalcrarkialashddathahvaeshqlgsviaefpttfeaaeasrkhgmnvlmgapnivrggshsgnvaaselaqlglldilssdyypaslldaafrvaddqsnrftlpqavklvtknpaqalnlqdrgvigegkradlvlahrkdnhihidhvwrqgkrvf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=phnM+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=phnM]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Phosphonate utilization is cryptic in K-12.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

phnM

Gene Synonym(s)

ECK4088, b4095, JW4056[1], JW4056

Product Desc.

ATP-binding component of phosphonate transport[2][3]

Carbon-phosphorus lyase complex subunit[4]

Product Synonyms(s)

carbon-phosphorus lyase complex subunit[1], B4095[2][1], PhnM[2][1] , ECK4088, JW4056, b4095

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): phnCDEEFGHIJKLMNOP[2], OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Phosphonate utilization is cryptic in K-12.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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