trmL:Quickview: Difference between revisions

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{{Tab On|Quickview|yibK}}{{Tab|Gene|yibK}}{{Tab|Gene Product(s)|yibK}}{{Tab|Expression|yibK}}{{Tab|Evolution|yibK}}{{Tab|On One Page|yibK}}{{TabsBottom}}
{{Tab On|Quickview|trmL}}{{Tab|Gene|trmL}}{{Tab|Gene Product(s)|trmL}}{{Tab|Expression|trmL}}{{Tab|Evolution|trmL}}{{Tab|On One Page|trmL}}{{TabsBottom}}
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{|{{Prettytable}}
{|   id="O49b03260cf6b0"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yibK:Gene|''yibK]]'' (synonyms: ''ECK3596, b3606, JW3581, gltE?'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''trmL''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yibK:Gene_Product(s)|YibK product]]<ref name='LIB:Riley_2006'/>: predicted rRNA methylase product, B3606 product
''yibK, ECK3596, b3606, JW3581, gltE?''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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predicted rRNA methylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted rRNA methylase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:predicted rRNA methylase|predicted rRNA methylase]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:predicted rRNA methylase|predicted rRNA methylase]]<ref name='LIB:EcoCyc11.1'/>


Putative methyltransferase, function unknown; spoU paralog; non-essential gene<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted rRNA methylase<ref name='LIB:Riley_2006'/>, B3606<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YibK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3596, JW3581, yibK, b3606''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yibK|yibK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yibK|yibK]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=trmL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11888]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001818&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=trmL&loc=MG1655%3A3779238..3779711,W3110%3A3859200..3858727,REL606%3A3721981..3722454,DH10B%3A3876815..3877288,BW2952%3A3667564..3668037]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3667564&end=3668037&gene=trmL&aa=mlnivlyepeippntgniirlcantgfrlhiiepmgfawddkrlrragldyheftavtrhhdyrafleaenpqrlfalttkgtpahsavsyqdgdylmfgpetrglpasildalpaeqkiripmvpdsrsmnlsnavsvvvyeawrqlgypgavlrd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=trmL+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=trmL]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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otherPDB (H. influenzae): 1J85, 1MXI.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

trmL

Gene Synonym(s)

yibK, ECK3596, b3606, JW3581, gltE?[1][2]

Product Desc.

predicted rRNA methylase[2][3];

Component of predicted rRNA methylase[3]

Putative methyltransferase, function unknown; spoU paralog; non-essential gene[4]

Product Synonyms(s)

predicted rRNA methylase[1], B3606[2][1], YibK[2][1] , ECK3596, JW3581, yibK, b3606

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yibK[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


otherPDB (H. influenzae): 1J85, 1MXI.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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