glcA:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="P49aee7292bc6f"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[glcA:Gene|''glcA]]'' (synonyms: ''yghK, ECK2969, b2975, JW2942'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''glcA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[glcA:Gene_Product(s)|YghK product]]<ref name='LIB:Riley_2006'/>: glycolate transporter product, B2975 product, GlcA product
''yghK, ECK2969, b2975, JW2942''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW2942''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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YghK glycolate transporter<ref name='LIB:EcoCyc10.6'/> GlcA glycolate transporter<ref name='LIB:EcoCyc11.1'/>  
YghK glycolate transporter<ref name='LIB:EcoCyc10.6'/>; GlcA glycolate transporter<ref name='LIB:EcoCyc11.1'/>


Glycolate permease; also recognizes lactate<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''glycolate transporter<ref name='LIB:Riley_2006'/>, B2975<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GlcA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YghK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2969, JW2942, yghK, b2975''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:glcDEFGBA|glcDEFGBA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:glcDEFGBA|glcDEFGBA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=glcA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7542]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004102&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=glcA&loc=REL606%3A3046489..3048171,MG1655%3A3119301..3117619,W3110%3A3119935..3118253,DH10B%3A3217046..3215364,BW2952%3A3004767..3006449]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3004767&end=3006449&gene=glcA&aa=mvtwtqmympmgglglsalvalipiifffvalavlrlkghvagaitlilsiliaifafkmpidmafaaagygfiyglwpiawiivaavflykltvasgqfdiirssvisitddqrlqvlligfsfgallegaagfgapvaitgallvglgfkplyaaglcliantapvafgalgvpilvagqvtgidpfhigamagrqlpflsvlvpfwlvammdgwkgvketwpaalvaggsfavtqfftsnyigpelpditsalvsivslalflkvwrpkntetaismgqsagamvvnkpssggpvpseyslgqiirawspfliltvlvtiwtmkpfkalfapggafyslvinfqiphlhqqvlkaapivaqptpmdavfkfdplsaggtaifiaaiisifilgvgikkgigvfaetlislkwpilsigmvlafafvtnysgmsttlalvlagtgvmfpffspflgwlgvfltgsdtssnalfgslqsttaqqinvsdtllvaantsggvtgkmispqsiavacaatgmvgreselfrytvkhslifasvigiitllqayvftgmlvs]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=glcA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=glcA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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IT (Ion Transporter) superfamily (Prakash, 2003). ST(3) structural class based on hydropathy profile (Lolkema, 2003).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

glcA

Gene Synonym(s)

yghK, ECK2969, b2975, JW2942[1][2], JW2942

Product Desc.

YghK glycolate transporter[2]; GlcA glycolate transporter[3]

Glycolate permease; also recognizes lactate[4]

Product Synonyms(s)

glycolate transporter[1], B2975[2][1], GlcA[2][1], YghK[2][1] , ECK2969, JW2942, yghK, b2975

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): glcDEFGBA[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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IT (Ion Transporter) superfamily (Prakash, 2003). ST(3) structural class based on hydropathy profile (Lolkema, 2003).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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