fryA:Quickview: Difference between revisions

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{|   id="O49aee67512a82"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[fryA:Gene|''fryA]]'' (synonyms: ''ypdD, ECK2379, b2383, JW2380'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''fryA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[fryA:Gene_Product(s)|YpdD product]]<ref name='LIB:Riley_2006'/>: fused predicted PTS enzymes: Hpr component product, enzyme I component product, enzyme IIA component product, B2383 product, FryA product
''ypdD, ECK2379, b2383, JW2380''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>, JW2380''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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fused predicted PTS system enzymes: Hpr component, enzyme I component, enzyme IIA component<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
fused predicted PTS system enzymes: Hpr component, enzyme I component, enzyme IIA component<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Putative fructose-like PTS system Enzyme I; also contains Hpr and EIIA domains<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''fused predicted PTS enzymes: Hpr component<ref name='LIB:Riley_2006'/>, enzyme I component<ref name='LIB:Riley_2006'/>, enzyme IIA component<ref name='LIB:Riley_2006'/>, B2383<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FryA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YpdD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2379, JW2380, ypdD, b2383''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ypdD|ypdD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ypdD|ypdD]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fryA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7246]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003821&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fryA&loc=MG1655%3A2502507..2500012,W3110%3A2509931..2507436,REL606%3A2436215..2438710,BW2952%3A2385817..2388312]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2385817&end=2388312&gene=fryA&aa=mltiqflcplpnglharpawelkeqcsqwqseitfinhrqnakadaksslaligtgtlfndscslnisgsdeeqarrvleeyiqvrfidsdsvqptqaeltahplprslsrlnpdllygnvlasgvgvgtltllqsdsldsyraipasaqdstrlehslatlaeqlnqqlrerdgesktilsahlsliqddefagnirrlmteqhqglgaaiisnmeqvcaklsasasdylrervsdirdiseqllhitwpelkprnklvlekptilvaedltpsqflsldlknlagmilektgrtshtlilarasaipvlsglpldaiaryagqpavldaqcgvlainpndavsgyyqvaqtladkrqkqqaqaaaqlaysrdnkridiaanigtaleapgafangaegvglfrtemlymdrdsapdeqeqfeayqqvllaagdkpiifrtmdiggdksipylnipqeenpflgyravriypefaglfrtqlrailraasfgnaqlmipmvhsldqilwvkgeiqkaivelkrdglrhaetitlgimvevpsvcyiidhfcdevdffsigsndmtqylyavdrnnprvsplynpitpsflrmlqqivttahqrgkwvgicgelggesrylplllglgldelsmsspripavksqlrqldseacrelarqacecrsaqeiealltaftpeedvrpllalenifvdqdfsnkeqaiqflcgnlgvngrtehpfeleedvwqreeivttgvgfgvaiphtksqwirhssisiarlakpigwqsemgevelvimltlganegmnhvkvfsqlarklvnknfrqslfaaqdaqsiltlleteltf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fryA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fryA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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AFMB Structural Genomics target No. 41 (http://afmb.cnrs-mrs.fr/article171.html).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fryA

Gene Synonym(s)

ypdD, ECK2379, b2383, JW2380[1][2][3], JW2380

Product Desc.

fused predicted PTS system enzymes: Hpr component, enzyme I component, enzyme IIA component[3][2]

Putative fructose-like PTS system Enzyme I; also contains Hpr and EIIA domains[4]

Product Synonyms(s)

fused predicted PTS enzymes: Hpr component[1], enzyme I component[1], enzyme IIA component[1], B2383[3][1], FryA[3][1], YpdD[3][1] , ECK2379, JW2380, ypdD, b2383

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ypdD[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


AFMB Structural Genomics target No. 41 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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