oppD:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="V49aeeede2ddc3"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[oppD:Gene|''oppD]]'' (synonyms: ''ECK1240, b1246, JW1238'')<ref name='LIB:Riley_2006'/>
''oppD''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[oppD:Gene_Product(s)|OppD product]]<ref name='LIB:Riley_2006'/>: oligopeptide transporter subunit product, ATP-binding component of ABC superfamily product, B1246 product
''ECK1240, b1246, JW1238''<ref name='LIB:Riley_2006'/>, JW1238''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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OppD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
OppD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:oligopeptide ABC transporter|oligopeptide ABC transporter]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:oligopeptide ABC transporter|oligopeptide ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Oligopeptide transport, ATP-binding protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''oligopeptide transporter subunit<ref name='LIB:Riley_2006'/>, ATP-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B1246<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OppD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1240, JW1238, b1246''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:oppABCDF|oppABCDF]]<ref name='LIB:EcoCyc10.6'/>, OP00313, oppABCD  
transcription unit(s): [[:Category:Txn_unit:oppABCDF|oppABCDF]]<ref name='LIB:EcoCyc10.6'/>, OP00313, oppABCD  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=oppD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10677]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000670&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=oppD&loc=MG1655%3A1302778..1303791,W3110%3A1306468..1307481,DH10B%3A1343796..1344809,REL606%3A1302348..1303361,BW2952%3A1193627..1194640]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1193627&end=1194640&gene=oppD&aa=msvietatvplaqqqadallnvkdlrvtfstpdgdvtavndlnfslragetlgivgesgsgksqtafalmgllaangriggsatfngreilnlpehelnklraeqismifqdpmtslnpymrvgeqlmevlmlhknmskaeafeesvrmldavkmpearkrmkmyphefsggmrqrvmiamallcrpklliadepttaldvtvqaqimtllnelkrefntaiimithdlvvvagicdkvlvmyagrtmeygnardvfyqpvhpysigllnavprldaegetmltipgnppnllrlpkgcpfqprcphameicssappleeftpgrlracfkpveell]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=oppD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=oppD]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

oppD

Gene Synonym(s)

ECK1240, b1246, JW1238[1], JW1238

Product Desc.

OppD[2][3];

Component of oligopeptide ABC transporter[2][3]

Oligopeptide transport, ATP-binding protein[4]

Product Synonyms(s)

oligopeptide transporter subunit[1], ATP-binding component of ABC superfamily[1], B1246[2][1], OppD[2][1] , ECK1240, JW1238, b1246

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): oppABCDF[2], OP00313, oppABCD

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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