gsiB:Quickview: Difference between revisions

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{|   id="Z49aee81b4c69e"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[gsiB:Gene|''gsiB]]'' (synonyms: ''yliB, ECK0820, b0830, JW5111'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''gsiB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[gsiB:Gene_Product(s)|YliB product]]<ref name='LIB:Riley_2006'/>: predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily product, B0830 product, GsiB product
''yliB, ECK0820, b0830, JW5111''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW5111''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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GsiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
GsiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:gsiABCD glutathione ABC transporter|gsiABCD glutathione ABC transporter]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:gsiABCD glutathione ABC transporter|gsiABCD glutathione ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Glutathione periplasmic binding protein; GsiABCD is an ABC transporter system<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0830<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YliB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GsiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0820, JW5111, yliB, b0830''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:iaaA|iaaA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:iaaA|iaaA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=gsiB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6430]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003030&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=gsiB&loc=MG1655%3A868634..870172,W3110%3A869833..871371,DH10B%3A922562..924100,BW2952%3A771602..773140]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=771602&end=773140&gene=gsiB&aa=maravhrsglvalgiatalmascafaakdvvvavgsnfttldpydandtlsqavaksfyqglfgldkemklknvlaesytvsddgitytvklregikfqdgtdfnaaavkanldrasdpanhlkrynlykniakteaidpttvkitlkqpfsafinilahpatamispaalekygkeigfypvgtgpyeldtwnqtdfvkvkkfagywqpglpkldsitwrpvadnntraamlqtgeaqfafpipyeqatlleknknielmaspsimqryismnvtqkpfdnpkvrealnyainrpalvkvafagyatpatgvvppsiayaqsykpwpydpvkarellkeagypngfsttlwsshnhstaqkvlqftqqqlaqvgikaqvtamdagqraaevegkgqkesgvrmfytgwsastgeadwalsplfasqnwpptlfntafysnkqvddflaqalktndpaektrlykaaqdiiwqespwiplvveklvsahsknltgfwimpdtgfsfedadlq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gsiB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=gsiB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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The first 26 aa are predicted to be a signal peptide. Lipoprotein prediction is a probable false positive: C23 is not conserved.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

gsiB

Gene Synonym(s)

yliB, ECK0820, b0830, JW5111[1][2], JW5111

Product Desc.

GsiB[2][3];

Component of gsiABCD glutathione ABC transporter[2][3]

Glutathione periplasmic binding protein; GsiABCD is an ABC transporter system[4]

Product Synonyms(s)

predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily[1], B0830[2][1], YliB[2][1], GsiB[2][1] , ECK0820, JW5111, yliB, b0830

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): iaaA[2]

Regulation/Activity
Quick Links



        

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Notes

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The first 26 aa are predicted to be a signal peptide. Lipoprotein prediction is a probable false positive: C23 is not conserved.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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