fadM:Quickview: Difference between revisions

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{{Tab On|Quickview|ybaW}}{{Tab|Gene|ybaW}}{{Tab|Gene Product(s)|ybaW}}{{Tab|Expression|ybaW}}{{Tab|Evolution|ybaW}}{{Tab|On One Page|ybaW}}{{TabsBottom}}
{{Tab On|Quickview|fadM}}{{Tab|Gene|fadM}}{{Tab|Gene Product(s)|fadM}}{{Tab|Expression|fadM}}{{Tab|Evolution|fadM}}{{Tab|On One Page|fadM}}{{TabsBottom}}
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|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybaW:Gene|''ybaW]]'' (synonyms: ''ECK0437, b0443, JW0433'')<ref name='LIB:Riley_2006'/>
''fadM''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybaW:Gene_Product(s)|YbaW product]]<ref name='LIB:Riley_2006'/>: conserved protein<ref name='LIB:Riley_2006'/>, B0443<ref name='LIB:EcoCyc10.6'/>, YbaW<ref name='LIB:EcoCyc10.6'/>
''ECK0437, b0443, JW0433'', ybaW, tesC<ref name='LIB:Riley_2006'/>, JW0433, tesC''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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conserved hypothetical protein<ref name='LIB:EcoCyc10.6'/>conserved protein<ref name='LIB:EcoCyc11.1'/>
conserved hypothetical protein<ref name='LIB:EcoCyc10.6'/>; conserved protein<ref name='LIB:EcoCyc11.1'/>
 


Thioesterase III; long-chain acyl-CoA thioesterase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''conserved protein<ref name='LIB:Riley_2006'/>, B0443<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0437, JW0433, tesC, ybaW, b0443''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ybaW|ybaW]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:fadM|fadM]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybaW&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybaW&loc=MG1655%3A463626..464024,W3110%3A463626..464024,DH10B%3A402957..403355,REL606%3A436469..436867,BW2952%3A366385..366783]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=366385&end=366783&gene=ybaW&aa=mqtqikvrgyhldvyqhvnnarylefleearwdglensdsfqwmtahniafvvvnininyrrpavlsdlltitsqlqqlngksgilsqvitlepegqvvadalitfvcidlktqkalalegelrekleqmvk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybaW+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybaW]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
3,5-tetradecadienoyl-CoA is the preferred substrate for thioesterase III, which is induced by fatty acids, suggesting a role in beta-oxidation of fatty acids (Nie, 2008).<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fadM

Gene Synonym(s)

ECK0437, b0443, JW0433, ybaW, tesC[1], JW0433, tesC

Product Desc.

conserved hypothetical protein[2]; conserved protein[3]

Thioesterase III; long-chain acyl-CoA thioesterase[4]

Product Synonyms(s)

conserved protein[1], B0443[2][1], YbaW[2][1] , ECK0437, JW0433, tesC, ybaW, b0443

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fadM[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


3,5-tetradecadienoyl-CoA is the preferred substrate for thioesterase III, which is induced by fatty acids, suggesting a role in beta-oxidation of fatty acids (Nie, 2008).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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