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{{Tab On|Quickview|lpcA}}{{Tab|Gene|lpcA}}{{Tab|Gene Product(s)|lpcA}}{{Tab|Expression|lpcA}}{{Tab|Evolution|lpcA}}{{Tab|On One Page|lpcA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lpcA:Gene|''lpcA]]'' (synonyms: ''ECK0223, b0222, JW0212, gmhA, yafI, tfrA, isn(H.i.), G343'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''lpcA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lpcA:Gene_Product(s)|LpcA product]]<ref name='LIB:Riley_2006'/>: D-sedoheptulose 7-phosphate isomerase<ref name='LIB:Riley_2006'/>, B0222<ref name='LIB:EcoCyc10.6'/>, YafI<ref name='LIB:EcoCyc10.6'/>, TfrA<ref name='LIB:EcoCyc10.6'/>, GmhA<ref name='LIB:EcoCyc10.6'/>, LpcA<ref name='LIB:EcoCyc10.6'/>
''ECK0223, b0222, JW0212, gmhA, yafI, tfrA, isn(H.i.), G343''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, isn''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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D-sedoheptulose 7-phosphate isomerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
D-sedoheptulose 7-phosphate isomerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Phosphoheptose isomerase; D-sedoheptulose 7-phosphate isomerase; GDP-heptose biosynthesis; T-phage resistance<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''D-sedoheptulose 7-phosphate isomerase<ref name='LIB:Riley_2006'/>, B0222<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YafI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TfrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GmhA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpcA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0223, gmhA, isn, JW0212, tfrA, yafI, b0222''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:lpcA|lpcA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:lpcA|lpcA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lpcA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6106]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002726&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lpcA&loc=MG1655%3A243543..244121,W3110%3A243543..244121,DH10B%3A217647..218225,REL606%3A248114..248692,BW2952%3A243542..244120]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=243542&end=244120&gene=lpcA&aa=myqdlirnelneaaetlanflkddanihaiqraavlladsfkaggkvlscgnggshcdamhfaeeltgryrenrpgypaiaisdvshiscvgndfgfndifsryveavgregdvllgistsgnsanvikaiaaarekgmkvitltgkdggkmagtadieirvphfgyadriqeihikvihiliqliekemvk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpcA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lpcA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lpcA

Gene Synonym(s)

ECK0223, b0222, JW0212, gmhA, yafI, tfrA, isn(H.i.), G343[1][2], isn

Product Desc.

D-sedoheptulose 7-phosphate isomerase[2][3]

Phosphoheptose isomerase; D-sedoheptulose 7-phosphate isomerase; GDP-heptose biosynthesis; T-phage resistance[4]

Product Synonyms(s)

D-sedoheptulose 7-phosphate isomerase[1], B0222[2][1], YafI[2][1], TfrA[2][1], GmhA[2][1], LpcA[2][1] , ECK0223, gmhA, isn, JW0212, tfrA, yafI, b0222

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lpcA[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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