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!Organism!!Homologs (Statistics)!!Comments
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''Mus musculus''   
''Mus musculus''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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From ECOO157CYC  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00089 PF00089  Trypsin]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00089 PFAM:PF00089]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50494 SUPERFAMILY:50494]
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[[EcoCyc]]
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EcoCyc:G6856
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13925
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003445
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3684
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0005340
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{RefHelp}}
<references/>
<references />
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Latest revision as of 08:32, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Mus musculus

  • MGI:2682935 (score: 1.000; bootstrap: 60%)
  • MGI:1354381 (score: 0.213)
  • MGI:2155445 (score: 0.210)
  • MGI:2384877 (score: 0.192)
  • MGI:1933407 (score: 0.180)
  • MGI:1196620 (score: 0.163)
  • MGI:1919003 (score: 0.149)
  • MGI:2686594 (score: 0.146)
  • MGI:3513175 (score: 0.140)
  • MGI:1349451 (score: 0.138)
  • MGI:3521861 (score: 0.131)
  • MGI:1338881 (score: 0.131)
  • MGI:1197523 (score: 0.130)
  • MGI:96942 (score: 0.127)
  • MGI:1917064 (score: 0.125)
  • MGI:1916698 (score: 0.124)
  • MGI:1349391 (score: 0.122)
  • MGI:1923810 (score: 0.122)
  • MGI:1100881 (score: 0.122)
  • MGI:2661234 (score: 0.121)
  • MGI:2684853 (score: 0.121)
  • MGI:2450123 (score: 0.121)
  • MGI:2442348 (score: 0.118)
  • MGI:96943 (score: 0.118)
  • MGI:2444058 (score: 0.115)
  • MGI:1920586 (score: 0.111)
  • MGI:1918253 (score: 0.111)
  • MGI:87884 (score: 0.110)
  • MGI:2685120 (score: 0.110)
  • MGI:1353645 (score: 0.107)
  • MGI:2385221 (score: 0.104)
  • MGI:2685865 (score: 0.103)
  • MGI:2442893 (score: 0.103)
  • MGI:2665280 (score: 0.103)
  • MGI:1270856 (score: 0.101)
  • MGI:1918287 (score: 0.099)
  • MGI:2681414 (score: 0.098)
  • MGI:1922252 (score: 0.098)
  • MGI:2149952 (score: 0.097)
  • MGI:1920632 (score: 0.094)
  • MGI:2149951 (score: 0.094)
  • MGI:88559 (score: 0.092)
  • MGI:1918085 (score: 0.091)
  • MGI:88558 (score: 0.090)
  • MGI:95316 (score: 0.089)
  • MGI:3605764 (score: 0.088)
  • MGI:105937 (score: 0.087)
  • MGI:3687012 (score: 0.087)
  • MGI:97611 (score: 0.087)
  • MGI:2684822 (score: 0.086)
  • MGI:97771 (score: 0.086)
  • MGI:102759 (score: 0.085)
  • MGI:95293 (score: 0.084)
  • MGI:1920876 (score: 0.084)
  • MGI:109325 (score: 0.084)
  • MGI:102758 (score: 0.083)
  • MGI:892019 (score: 0.083)
  • MGI:102757 (score: 0.082)
  • MGI:3646222 (score: 0.082)
  • MGI:3045752 (score: 0.082)
  • MGI:1914623 (score: 0.082)
  • MGI:98839 (score: 0.081)
  • MGI:892023 (score: 0.081)
  • MGI:1270857 (score: 0.081)
  • MGI:97322 (score: 0.080)
  • MGI:1343166 (score: 0.078)
  • MGI:95314 (score: 0.077)
  • MGI:102850 (score: 0.077)
  • MGI:892020 (score: 0.074)
  • MGI:88384 (score: 0.074)
  • MGI:3615275 (score: 0.073)
  • MGI:1346336 (score: 0.070)
  • MGI:95291 (score: 0.070)
  • MGI:109266 (score: 0.070)
  • MGI:891981 (score: 0.069)
  • MGI:892021 (score: 0.068)
  • MGI:88380 (score: 0.067)
  • MGI:97320 (score: 0.067)
  • MGI:1916761 (score: 0.067)
  • MGI:1929977 (score: 0.067)
  • MGI:892022 (score: 0.067)
  • MGI:891980 (score: 0.066)
  • MGI:1298232 (score: 0.066)
  • MGI:1916790 (score: 0.066)
  • MGI:1343327 (score: 0.066)
  • MGI:2447533 (score: 0.066)
  • MGI:2447303 (score: 0.066)
  • MGI:95292 (score: 0.066)
  • MGI:892018 (score: 0.065)
  • MGI:88492 (score: 0.062)
  • MGI:87931 (score: 0.062)
  • MGI:1921556 (score: 0.059)
  • MGI:2447564 (score: 0.059)
  • MGI:1915118 (score: 0.058)
  • MGI:1921082 (score: 0.057)
  • MGI:1915918 (score: 0.055)
  • MGI:1923951 (score: 0.054)
  • MGI:109254 (score: 0.053)

From Inparanoid:20070104

Shigella flexneri

S1751

From SHIGELLACYC

E. coli O157

Z2592

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00089 Trypsin

Superfamily (EcoliWiki Page)

SUPERFAMILY:50494

EcoCyc

EcoCyc:G6856

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13925

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003445

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3684

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0005340

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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