bioB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Oryza gramene''   
''Oryza gramene''   
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From Inparanoid:20070104  
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF04055 PF04055  Radical SAM superfamily]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22976:SF1 PTHR22976:SF1]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF04055 PFAM:PF04055]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=102114 SUPERFAMILY:102114]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF06968 PF06968  Biotin and Thiamin Synthesis associated domain]
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[[EcoCyc]]
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EcoCyc:EG10118
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10118
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000114
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0116
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0002644
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
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===Categories===
===Categories===
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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G43360 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q69U93 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGR286C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC12352 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

BIOB

From SHIGELLACYC

E. coli O157

BIOB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF04055 Radical SAM superfamily

Panther (EcoliWiki Page)

PTHR22976:SF1

Superfamily (EcoliWiki Page)

SUPERFAMILY:102114

Pfam (EcoliWiki Page)

PF06968 Biotin and Thiamin Synthesis associated domain

EcoCyc

EcoCyc:EG10118

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10118

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000114

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0116

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002644

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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