araD:Quickview: Difference between revisions

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{{Tab On|Quickview|araD}}{{Tab|Gene|araD}}{{Tab|Gene Product(s)|araD}}{{Tab|Expression|araD}}{{Tab|Evolution|araD}}{{Tab|On One Page|araD}}{{TabsBottom}}
{{Tab On|Quickview|araD}}{{Tab|Gene|araD}}{{Tab|Gene Product(s)|araD}}{{Tab|Expression|araD}}{{Tab|Evolution|araD}}{{Tab|On One Page|araD}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[araD:Gene|''araD]]'' (synonyms: ''ECK0062, b0061, JW0060'')<ref name='LIB:Riley_2006'/>
''araD''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[araD:Gene_Product(s)|AraD product]]<ref name='LIB:Riley_2006'/>: L-ribulose-5-phosphate 4-epimerase<ref name='LIB:Riley_2006'/>, B0061<ref name='LIB:EcoCyc10.6'/>, AraD<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:L-ribulose-phosphate 4-epimerase|L-ribulose-phosphate 4-epimerase]]<ref name='LIB:EcoCyc10.6'/>
''ECK0062, b0061, JW0060''<ref name='LIB:Riley_2006'/>, JW0060''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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L-ribulose-phosphate 4-epimerase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
L-ribulose-phosphate 4-epimerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:L-ribulose-phosphate 4-epimerase|L-ribulose-phosphate 4-epimerase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


L-ribulose-5-phosphate 4-epimerase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''L-ribulose-5-phosphate 4-epimerase<ref name='LIB:Riley_2006'/>, B0061<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0062, JW0060, b0061''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:araBAD|araBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00302, ara  
transcription unit(s): [[:Category:Txn_unit:araBAD|araBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00302, ara  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=araD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10055]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000051&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=araD&loc=MG1655%3A66550..65855,W3110%3A66550..65855,REL606%3A69354..68659,BW2952%3A65855..66549]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=65855&end=66549&gene=araD&aa=mledlkrqvleanlalpkhnlvtltwgnvsavdrergvfvikpsgvdysvmtaddmvvvsietgevvegtkkpssdtpthrllyqafpsiggivhthsrhatiwaqagqsipatgtthadyfygtipctrkmtdaeingeyewetgnvivetfekqgidaaqmpgvlvhshgpfawgknaedavhnaivleevaymgifcrqlapqlpdmqqtlldkhylrkhgakayygq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=araD+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=araD]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
AraD is a masked class II aldolase.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

araD

Gene Synonym(s)

ECK0062, b0061, JW0060[1], JW0060

Product Desc.

L-ribulose-phosphate 4-epimerase[2][3];

Component of L-ribulose-phosphate 4-epimerase[2][3]

L-ribulose-5-phosphate 4-epimerase[4]

Product Synonyms(s)

L-ribulose-5-phosphate 4-epimerase[1], B0061[2][1], AraD[2][1] , ECK0062, JW0060, b0061

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): araBAD[2], OP00302, ara

Regulation/Activity
Quick Links



        

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Notes

[back to top]


AraD is a masked class II aldolase.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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