djlA:Quickview: Difference between revisions

Latest revision as of 21:51, 27 May 2013

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Quickview

Gene

Standard Name	djlA
Gene Synonym(s)	ECK0056, b0055, JW0054, yabH^[1], yabH
Product Desc.	chaperone with DnaK^[2]^[3] DnaK co-chaperone; membrane-asssociated protein with single transmembrane domain and a C-terminal J-like domain; mutants rapidly accumulate suppressors^[4]
Product Synonyms(s)	DnaJ-like protein, membrane anchored^[1], B0055^[2]^[1], YabH^[2]^[1], DjlA^[2]^[1] , ECK0056, JW0054, yabH, b0055
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): djlA^[2]
Regulation/Activity
Quick Links
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Notes

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DjlA overproduction activates RcsBC and Cps synthesis and causes mucoidy. Normal levels of DjlA act as an Rcs negative regulator. The DjlA transmembrane domain is a dimerization domain.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1]

[2]

[3]

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 {{Tab On|Quickview|djlA}}{{Tab|Gene|djlA}}{{Tab|Gene Product(s)|djlA}}{{Tab|Expression|djlA}}{{Tab|Evolution|djlA}}{{Tab|On One Page|djlA}}{{TabsBottom}}
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+{|   id="X49aee3d55d1d1"  class=" tableEdit New_Quickview_Table"
 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[djlA:Gene|''djlA]]'' (synonyms: ''ECK0056, b0055, JW0054, yabH'')<ref name='LIB:Riley_2006'/>
+''djlA''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[djlA:Gene_Product(s)|DjlA product]]<ref name='LIB:Riley_2006'/>: DnaJ-like protein, membrane anchored<ref name='LIB:Riley_2006'/>, B0055<ref name='LIB:EcoCyc10.6'/>, YabH<ref name='LIB:EcoCyc10.6'/>, DjlA<ref name='LIB:EcoCyc10.6'/>
+''ECK0056, b0055, JW0054, yabH''<ref name='LIB:Riley_2006'/>, yabH''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
 chaperone with DnaK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+DnaK co-chaperone; membrane-asssociated protein with single transmembrane domain and a C-terminal J-like domain; mutants rapidly accumulate suppressors<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''DnaJ-like protein, membrane anchored<ref name='LIB:Riley_2006'/>, B0055<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DjlA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0056, JW0054, yabH, b0055''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
-transcription unit(s): [[:Category:txn_units:djlA|djlA]]<ref name='LIB:EcoCyc10.6'/>
+transcription unit(s): [[:Category:Txn_unit:djlA|djlA]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=djlA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11570]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001522&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=djlA&loc=MG1655%3A57364..58179,W3110%3A57364..58179,DH10B%3A57364..58179,REL606%3A61559..62374,BW2952%3A57364..58179]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=57364&end=58179&gene=djlA&aa=mqywgkiigvavallmgggfwgvvlgllighmfdkarsrkmawfanqrerqalffattfevmghltkskgrvteadihiasqlmdrmnlhgasrtaaqnafrvgksdnyplrekmrqfrsvcfgrfdlirmfleiqiqaafadgslhpneravlyviaeelgisraqfdqflrmmqggaqfgggyqqqtgggnwqqaqrgptledacnvlgvkptddattikrayrklmsehhpdklvakglppemmemakqkaqeiqqayelikqqkgfk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=djlA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=djlA]]&nbsp;&nbsp;
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 <protect><!--Quickview_notes--></protect>
-==Notes==
+===Notes===
+{{BacktoTop}}
+DjlA overproduction activates RcsBC and Cps synthesis and causes mucoidy.  Normal levels of DjlA act as an Rcs negative regulator. The DjlA transmembrane domain is a dimerization domain.<ref name='LIB:EcoGene'/>
 <noinclude>
 ==References==
+{{BacktoTop}}
 <references/>
 </noinclude>

djlA:Quickview: Difference between revisions

Latest revision as of 21:51, 27 May 2013

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