ydbA 2:Evolution: Difference between revisions
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Adding evolution_families_table to Evolution pages. |
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===Do-It-Yourself Web Tools=== | ===Do-It-Yourself Web Tools=== | ||
*[http://130.14.29.110/BLAST/ BLAST] | *[http://130.14.29.110/BLAST/ BLAST] | ||
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD] | *[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD] | ||
*[http://inparanoid.sbc.su.se/cgi-bin/ | *[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid] | ||
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY] | *[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY] | ||
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* | * | ||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** -->{{Evolution_homologs_table_help}} | ||
{| id="D46abbe714b579" class=" tableEdit Evolution_homologs_table" | |||
|- {{table heading style}} | |- {{table heading style}} | ||
!Organism!!Homologs (Statistics)!!Comments | !|Organism!!Homologs (Statistics)!!Comments | ||
|- | |- | ||
| | | | ||
''E. coli'' O157 | ''E. coli'' O157 | ||
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From ECOO157CYC | From ECOO157CYC | ||
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|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46783.D46abbe714b579&page=46783&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> || || | |||
|} | |} | ||
<!--box uid=421aa90e079fa326b6494f812ad13e79.46783.D46abbe714b579--> | <!--box uid=421aa90e079fa326b6494f812ad13e79.46783.D46abbe714b579--> | ||
<protect><!--Families_notes--></protect> | <protect><!--Families_notes--></protect> | ||
===Notes=== | |||
==Families== | |||
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<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.46783.U4c604f1a0bb03--> | |||
<!-- | |||
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | |||
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****************************************************************************************** -->{{Evolution_families_table_help}} | |||
{| id="U4c604f1a0bb03" class=" tableEdit Evolution_families_table" | |||
|- {{table heading style}} | |||
!|Database!!Accession!!Notes | |||
|- class="tableEdit_footer" | |||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.46783.U4c604f1a0bb03&page=46783&pagename={{FULLPAGENAMEE}}&type=0&template=Evolution_families_table edit table]</span> || || | |||
|} | |||
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.46783.U4c604f1a0bb03--></protect> | |||
<protect><!--Families_notes--></protect> | |||
===Notes=== | ===Notes=== | ||
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{|class = | {| id="V46a808ee5f652" class=" tableEdit Links_table" | ||
|- {{table_heading_style}} | |- {{table_heading_style}} | ||
!Name!!URL!!Comments | !|Name!!URL!!Comments | ||
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|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46783.V46a808ee5f652&page=46783&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || || | |||
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==References== | ==References== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
{{RefHelp}} | {{RefHelp}} | ||
<references/ | <references /> | ||
__NOTOC__ | __NOTOC__ | ||
===Categories=== | ===Categories=== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
[[Category:Genes with homologs in E. coli O157]] | [[Category:Genes with homologs in E. coli O157]] | ||
Latest revision as of 18:55, 9 August 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Homologs | Families | Links | References | Suggestions |
Homologs in Other Organisms
Do-It-Yourself Web Tools
Notes
Families
See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.
| Organism | Homologs (Statistics) | Comments |
|---|---|---|
|
E. coli O157 |
Z2322 |
From ECOO157CYC |
| edit table |
Notes
Families
See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.
| Database | Accession | Notes |
|---|---|---|
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
Categories