GenoBase: Difference between revisions
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[[Category:Databases]][[Category: | [[Category:Databases]][[Category:PortEco Partner]] | ||
{|{{Prettytable}} width='30%' align = | [[Category:E. coli Databases]] | ||
[[Category:IECA_Portal]] | |||
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{| {{Prettytable}} width='30%' align="right" id="W4a244896f38f3" class=" tableEdit Database_table" | |||
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!align=left {{table heading style}} |Link/URL: | |||
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[http://ecoli.aist-nara.ac.jp/GB5/search.jsp GenoBase] | |||
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!align=left {{table heading style}} |What: | |||
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Public repository for Sequence Information, Proteome, Transcriptome, Bioinformatics, and Knowledge based on literature concerning E. coli. | |||
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| | !align=left {{table heading style}} |Who: | ||
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Nara Institute of Science and Technology (Japan) | |||
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| Updates | !align=left {{table heading style}} |Updates: | ||
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| Upcoming events | !align=left {{table heading style}} |Upcoming events: | ||
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| Web Services | !align=left {{table heading style}} |Web Services: | ||
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=About {{PAGENAME}}= | =About {{PAGENAME}}= | ||
[[Image:Genobase_home.jpg|right|300px|thumb|Home Page]] | |||
[ | Genebase is the sequencing database for ''E.coli'' W3110. | ||
=Content= | =Content= | ||
genomic sequence<BR> | |||
ORF clones <BR> | |||
tagged protein expression and purification<BR> | |||
overexpression screening (toxicity effects, etc.) <BR> | |||
transcriptome<BR> | |||
RNAs and other sequence elements<BR> | |||
Localization info (GFP tagged proteins) | |||
Various clone libraries<BR> | |||
Keio clones<BR> | |||
ASKA clones<BR> | |||
Kohara phage clones | |||
=Using {{PAGENAME}}= | =Using {{PAGENAME}}= | ||
==Browsing== | ==Browsing== | ||
==Searching== | ==Searching== | ||
query by JW# (http://ecoli.aist-nara.ac.jp/GB5/info.jsp?id=JW1840) | query by JW# (http://ecoli.aist-nara.ac.jp/GB5/info.jsp?id=JW1840) | ||
Search by keyword (gene name) or by homology (blast) | |||
''''Resources'''<BR> | |||
Genome sequence<BR> | |||
Genes ORFs<BR> | |||
tRNA/rRNA/ otherRNAs<BR> | |||
Sequence elements<BR> | |||
Kohara clones<BR> | |||
ASKA library<BR> | |||
Keio collection<BR> | |||
==Usage examples== | ==Usage examples== | ||
Latest revision as of 15:54, 30 June 2011
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| Link/URL: | |
|---|---|
| What: |
Public repository for Sequence Information, Proteome, Transcriptome, Bioinformatics, and Knowledge based on literature concerning E. coli. |
| Who: |
Nara Institute of Science and Technology (Japan) |
| Updates: | |
| Upcoming events: | |
| Web Services: |
|
| edit table |
About GenoBase
Genebase is the sequencing database for E.coli W3110.
Content
genomic sequence
ORF clones
tagged protein expression and purification
overexpression screening (toxicity effects, etc.)
transcriptome
RNAs and other sequence elements
Localization info (GFP tagged proteins)
Various clone libraries
Keio clones
ASKA clones
Kohara phage clones
Using GenoBase
Browsing
Searching
query by JW# (http://ecoli.aist-nara.ac.jp/GB5/info.jsp?id=JW1840)
Search by keyword (gene name) or by homology (blast)
'Resources
Genome sequence
Genes ORFs
tRNA/rRNA/ otherRNAs
Sequence elements
Kohara clones
ASKA library
Keio collection
Usage examples
Add links to additional pages describing success stories here.