fecI:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[fecI:Gene|''fecI]]'' (synonyms: ''ECK4283, b4293, JW4253'')<ref name='LIB:Riley_2006'/>
''fecI''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[fecI:Gene_Product(s)|FecI product]]<ref name='LIB:Riley_2006'/>: KpLE2 phage-like element; RNA polymerase, sigma 19 factor product, B4293 product, citrate-dependent iron transport gene mediating induction by iron product
''ECK4283, b4293, JW4253''<ref name='LIB:Riley_2006'/>, JW4253''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RNA polymerase, sigma19 factor<ref name='LIB:EcoCyc10.6'/> RNA polymerase, sigma 19 factor<ref name='LIB:EcoCyc11.1'/>  
RNA polymerase, sigma19 factor<ref name='LIB:EcoCyc10.6'/>; RNA polymerase, sigma 19 factor<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RNA polymerase sigma 19|RNA polymerase sigma 19]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:RNA polymerase sigma 19|RNA polymerase sigma 19]]<ref name='LIB:EcoCyc11.1'/>


Alternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''KpLE2 phage-like element; RNA polymerase, sigma 19 factor<ref name='LIB:Riley_2006'/>, B4293<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FecI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, citrate-dependent iron transport gene mediating induction by iron<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4283, JW4253, b4293''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fecIR|fecIR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:fecIR|fecIR]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fecI&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10291]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000285&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fecI&loc=MG1655%3A4516258..4515737,W3110%3A4522915..4522394,REL606%3A4503267..4502746,DH10B%3A4618066..4617545,BW2952%3A4454472..4454993]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4454472&end=4454993&gene=fecI&aa=msdratttasltfeslygthhgwlkswltrklqsafdaddiaqdtflrvmvsetlstirdprsflctiakrvmvdlfrrnalekaylemlalmpeggapspeeresqletlqlldsmldglngktreafllsqldgltyseiahklgvsissvkkyvakavehcllfrleygl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fecI+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fecI]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
{{BacktoTop}}
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Polyamine modulon.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fecI

Gene Synonym(s)

ECK4283, b4293, JW4253[1], JW4253

Product Desc.

RNA polymerase, sigma19 factor[2]; RNA polymerase, sigma 19 factor[3];

Component of RNA polymerase sigma 19[3]

Alternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR[4]

Product Synonyms(s)

KpLE2 phage-like element; RNA polymerase, sigma 19 factor[1], B4293[2][1], FecI[2][1], citrate-dependent iron transport gene mediating induction by iron[2][1] , ECK4283, JW4253, b4293

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fecIR[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Polyamine modulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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