scpC:Quickview: Difference between revisions

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{|   id="K49b024b7b5b9e"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[scpC:Gene|''scpC]]'' (synonyms: ''ygfH, ECK2916, b2920, JW2887'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''scpC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[scpC:Gene_Product(s)|YgfH product]]<ref name='LIB:Riley_2006'/>: propionyl-CoA:succinate-CoA transferase product, B2920 product, ScpC product
''ygfH, ECK2916, b2920, JW2887''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, JW2887''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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G7517-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
G7517<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Propionyl CoA:succinate CoA transferase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''propionyl-CoA:succinate-CoA transferase<ref name='LIB:Riley_2006'/>, B2920<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ScpC<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK2916, JW2887, ygfH, b2920''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:scpA-argK-ygfGH|scpA-argK-ygfGH]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:scpA-argK-ygfGH|scpA-argK-ygfGH]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=scpC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7517]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004079&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=scpC&loc=MG1655%3A3062824..3064302,W3110%3A3063458..3064936,REL606%3A2950553..2952031,BW2952%3A2949972..2951450]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2949972&end=2951450&gene=scpC&aa=metqwtrmtaneaaeiiqhndmvafsgftpagspkalptaiarraneqheakkpyqirlltgasisaaaddvlsdadavswrapyqtssglrkkinqgavsfvdlhlsevaqmvnygffgdidvavieasalapdgrvwltsgignaptwllrakkviielnhyhdprvaeladivipgapprrnsvsifhamdrvgtryvqidpkkivavvetnlpdagnmldkqnpmcqqiadnvvtfllqemahgrippeflplqsgvgninnavmarlgenpvippfmmysevlqesvvhlletgkisgasassltisadslrkiydnmdyfasrivlrpqeisnnpeiirrlgvialnvglefdiyghansthvagvdlmngiggsgdfernaylsifmapsiakegkistvvpmcshvdhsehsvkviiteqgiadlrglsplqrartiidncahpmyrdylhrylenapgghihhdlshvfdlhrnliatgsmlg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=scpC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=scpC]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Part of a four gene operon encoding enzymes converting succinate to propionate.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

scpC

Gene Synonym(s)

ygfH, ECK2916, b2920, JW2887[1][2], JW2887

Product Desc.

G7517[3][2]

Propionyl CoA:succinate CoA transferase[4]

Product Synonyms(s)

propionyl-CoA:succinate-CoA transferase[1], B2920[3][1], YgfH[3][1], ScpC[2][1] , ECK2916, JW2887, ygfH, b2920

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): scpA-argK-ygfGH[3]

Regulation/Activity
Quick Links



        

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Notes

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Part of a four gene operon encoding enzymes converting succinate to propionate.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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