hemF:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="X49aee8975c6a7"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[hemF:Gene|''hemF]]'' (synonyms: ''ECK2431, b2436, JW2429, popB, sec'')<ref name='LIB:Riley_2006'/>
''hemF''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[hemF:Gene_Product(s)|HemF product]]<ref name='LIB:Riley_2006'/>: coproporphyrinogen III oxidase product, B2436 product, Sec product, PopB product
''ECK2431, b2436, JW2429, popB, sec''<ref name='LIB:Riley_2006'/>, sec''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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COPROGENOXI-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Coproporphyrinogen III oxidase, oxygen-dependent; stimulated by manganese; dimeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''coproporphyrinogen III oxidase<ref name='LIB:Riley_2006'/>, B2436<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sec<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PopB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HemF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2431, JW2429, popB, sec, b2436''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hemF|hemF]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:amiA-hemF|amiA-hemF]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hemF|hemF]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:amiA-hemF|amiA-hemF]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hemF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12189]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002078&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hemF&loc=MG1655%3A2551247..2552146,W3110%3A2558671..2559570,REL606%3A2480744..2481643,DH10B%3A2643012..2643911,BW2952%3A2437052..2437951]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2437052&end=2437951&gene=hemF&aa=mkpdahqvkqfllnlqdticqqltavdgaefvedswqreaggggrsrvlrnggvfeqagvnfshvhgeampasatahrpelagrsfeamgvslvvhphnpyvptshanvrffiaekpgadpvwwfgggfdltpfygfeedaihwhrtardlclpfgedvyprykkwcdeyfylkhrneqrgigglffddlntpdfdrcfafmqavgkgytdaylpiverrkamaygerernfqlyrrgryvefnlvwdrgtlfglqtggrtesilmsmpplvrweydyqpkdgspeaalsefikvrdwv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hemF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hemF]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hemF

Gene Synonym(s)

ECK2431, b2436, JW2429, popB, sec[1], sec

Product Desc.

Coproporphyrinogen III oxidase, oxygen-dependent; stimulated by manganese; dimeric[2]

Product Synonyms(s)

coproporphyrinogen III oxidase[1], B2436[3][1], Sec[3][1], PopB[3][1], HemF[3][1] , ECK2431, JW2429, popB, sec, b2436

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hemF[3], amiA-hemF[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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